Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70576.1 | ABK71597.1 | MSMEG_4379 | MSMEG_2148 | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.612 |
| ABK70576.1 | ABK73938.1 | MSMEG_4379 | MSMEG_4976 | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.672 |
| ABK70980.1 | ABK71597.1 | MSMEG_3244 | MSMEG_2148 | Hypothetical protein; Identified by Glimmer2; putative. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.775 |
| ABK70980.1 | ABK72493.1 | MSMEG_3244 | MSMEG_4083 | Hypothetical protein; Identified by Glimmer2; putative. | Putative monooxygenase. | 0.822 |
| ABK70980.1 | aroB | MSMEG_3244 | MSMEG_3033 | Hypothetical protein; Identified by Glimmer2; putative. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.817 |
| ABK71597.1 | ABK70576.1 | MSMEG_2148 | MSMEG_4379 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.612 |
| ABK71597.1 | ABK70980.1 | MSMEG_2148 | MSMEG_3244 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Hypothetical protein; Identified by Glimmer2; putative. | 0.775 |
| ABK71597.1 | ABK72480.1 | MSMEG_2148 | MSMEG_5061 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.750 |
| ABK71597.1 | ABK72493.1 | MSMEG_2148 | MSMEG_4083 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Putative monooxygenase. | 0.773 |
| ABK71597.1 | ABK73938.1 | MSMEG_2148 | MSMEG_4976 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.607 |
| ABK71597.1 | ABK75725.1 | MSMEG_2148 | MSMEG_3677 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | 0.785 |
| ABK71597.1 | ABK76042.1 | MSMEG_2148 | MSMEG_4396 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. | 0.607 |
| ABK71597.1 | aroB | MSMEG_2148 | MSMEG_3033 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.607 |
| ABK71597.1 | oppD | MSMEG_2148 | MSMEG_4997 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | ABC transporter, ATP-binding protein OppD; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.678 |
| ABK71597.1 | ruvC | MSMEG_2148 | MSMEG_2943 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.563 |
| ABK72480.1 | ABK71597.1 | MSMEG_5061 | MSMEG_2148 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.750 |
| ABK72480.1 | ABK75725.1 | MSMEG_5061 | MSMEG_3677 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | 0.823 |
| ABK72480.1 | oppD | MSMEG_5061 | MSMEG_4997 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, ATP-binding protein OppD; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.823 |
| ABK72493.1 | ABK70980.1 | MSMEG_4083 | MSMEG_3244 | Putative monooxygenase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.822 |
| ABK72493.1 | ABK71597.1 | MSMEG_4083 | MSMEG_2148 | Putative monooxygenase. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.773 |
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