STRINGSTRING
ABK70289.1 ABK70289.1 ABK76225.1 ABK76225.1 ABK73262.1 ABK73262.1 ABK73574.1 ABK73574.1 ABK75534.1 ABK75534.1 ABK74112.1 ABK74112.1 ABK75177.1 ABK75177.1 ABK71012.1 ABK71012.1 ABK72313.1 ABK72313.1 ABK73594.1 ABK73594.1 ABK71994.1 ABK71994.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70289.1Conserved hypothetical protein. (274 aa)    
Predicted Functional Partners:
ABK76225.1
trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00107.
  
   0.641
ABK73262.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.556
ABK73574.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05368.
  
   0.551
ABK75534.1
acyl-CoA oxidase; Identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770.
 
 
 0.510
ABK74112.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
 
 0.507
ABK75177.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 
 0.476
ABK71012.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
 
 0.470
ABK72313.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
 
 0.470
ABK73594.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
  
 
 0.467
ABK71994.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
 
 0.467
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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