Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69675.1 | ABK69959.1 | MSMEG_5753 | MSMEG_1403 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.738 |
| ABK69675.1 | ABK71717.1 | MSMEG_5753 | MSMEG_2157 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Hypothetical protein; Identified by Glimmer2; putative. | 0.657 |
| ABK69675.1 | ABK74753.1 | MSMEG_5753 | MSMEG_0221 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Secreted protein. | 0.501 |
| ABK69675.1 | ABK75214.1 | MSMEG_5753 | MSMEG_2774 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Diguanylate cyclase (ggdef) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.514 |
| ABK69675.1 | ABK75522.1 | MSMEG_5753 | MSMEG_3570 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.483 |
| ABK69755.1 | ABK69959.1 | MSMEG_6555 | MSMEG_1403 | Transcriptional regulator, TetR family protein, putative. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.514 |
| ABK69755.1 | ABK71717.1 | MSMEG_6555 | MSMEG_2157 | Transcriptional regulator, TetR family protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.528 |
| ABK69755.1 | ABK73376.1 | MSMEG_6555 | MSMEG_0090 | Transcriptional regulator, TetR family protein, putative. | Conserved hypothetical protein. | 0.491 |
| ABK69755.1 | ABK75214.1 | MSMEG_6555 | MSMEG_2774 | Transcriptional regulator, TetR family protein, putative. | Diguanylate cyclase (ggdef) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.645 |
| ABK69755.1 | ABK75418.1 | MSMEG_6555 | MSMEG_4647 | Transcriptional regulator, TetR family protein, putative. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.597 |
| ABK69755.1 | ABK75522.1 | MSMEG_6555 | MSMEG_3570 | Transcriptional regulator, TetR family protein, putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.707 |
| ABK69959.1 | ABK69675.1 | MSMEG_1403 | MSMEG_5753 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.738 |
| ABK69959.1 | ABK69755.1 | MSMEG_1403 | MSMEG_6555 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Transcriptional regulator, TetR family protein, putative. | 0.514 |
| ABK69959.1 | ABK71717.1 | MSMEG_1403 | MSMEG_2157 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Hypothetical protein; Identified by Glimmer2; putative. | 0.669 |
| ABK69959.1 | ABK73376.1 | MSMEG_1403 | MSMEG_0090 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.671 |
| ABK69959.1 | ABK74753.1 | MSMEG_1403 | MSMEG_0221 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Secreted protein. | 0.642 |
| ABK69959.1 | ABK75214.1 | MSMEG_1403 | MSMEG_2774 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Diguanylate cyclase (ggdef) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.705 |
| ABK69959.1 | ABK75418.1 | MSMEG_1403 | MSMEG_4647 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.734 |
| ABK69959.1 | ABK75522.1 | MSMEG_1403 | MSMEG_3570 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.742 |
| ABK71717.1 | ABK69675.1 | MSMEG_2157 | MSMEG_5753 | Hypothetical protein; Identified by Glimmer2; putative. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.657 |
page 1 of 4