Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70757.1 | ABK72268.1 | MSMEG_0528 | MSMEG_6703 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | 0.702 |
ABK70757.1 | ABK73624.1 | MSMEG_0528 | MSMEG_2850 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.630 |
ABK70757.1 | ABK74167.1 | MSMEG_0528 | MSMEG_3004 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.622 |
ABK70757.1 | ABK74557.1 | MSMEG_0528 | MSMEG_3909 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.499 |
ABK70757.1 | ABK74594.1 | MSMEG_0528 | MSMEG_2162 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | MmcJ protein. | 0.561 |
ABK70757.1 | ABK75525.1 | MSMEG_0528 | MSMEG_6621 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Identified by match to protein family HMM PF00296. | 0.709 |
ABK70757.1 | ABK75915.1 | MSMEG_0528 | MSMEG_4398 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.708 |
ABK72268.1 | ABK70757.1 | MSMEG_6703 | MSMEG_0528 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.702 |
ABK72268.1 | ABK72942.1 | MSMEG_6703 | MSMEG_5732 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.722 |
ABK72268.1 | ABK73624.1 | MSMEG_6703 | MSMEG_2850 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.728 |
ABK72268.1 | ABK74167.1 | MSMEG_6703 | MSMEG_3004 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.732 |
ABK72268.1 | ABK74557.1 | MSMEG_6703 | MSMEG_3909 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.673 |
ABK72268.1 | ABK74594.1 | MSMEG_6703 | MSMEG_2162 | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | MmcJ protein. | 0.702 |
ABK72942.1 | ABK72268.1 | MSMEG_5732 | MSMEG_6703 | Monooxygenase; Identified by match to protein family HMM PF00296. | N5,N10- methylenetetrahydromethanopterin reductase-related protein. | 0.722 |
ABK72942.1 | ABK73624.1 | MSMEG_5732 | MSMEG_2850 | Monooxygenase; Identified by match to protein family HMM PF00296. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.652 |
ABK72942.1 | ABK74167.1 | MSMEG_5732 | MSMEG_3004 | Monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.664 |
ABK72942.1 | ABK74557.1 | MSMEG_5732 | MSMEG_3909 | Monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.515 |
ABK72942.1 | ABK74594.1 | MSMEG_5732 | MSMEG_2162 | Monooxygenase; Identified by match to protein family HMM PF00296. | MmcJ protein. | 0.545 |
ABK72942.1 | ABK75525.1 | MSMEG_5732 | MSMEG_6621 | Monooxygenase; Identified by match to protein family HMM PF00296. | Identified by match to protein family HMM PF00296. | 0.721 |
ABK72942.1 | ABK75607.1 | MSMEG_5732 | MSMEG_3544 | Monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.718 |
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