Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69666.1 | ABK69940.1 | MSMEG_2174 | MSMEG_4708 | Superfamily protein I DNA or RNA helicase. | Putative methyltransferase; Identified by match to protein family HMM PF05401. | 0.815 |
| ABK69666.1 | ABK71560.1 | MSMEG_2174 | MSMEG_2176 | Superfamily protein I DNA or RNA helicase. | Conserved hypothetical protein. | 0.666 |
| ABK69666.1 | ABK72024.1 | MSMEG_2174 | MSMEG_2252 | Superfamily protein I DNA or RNA helicase. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.816 |
| ABK69666.1 | ABK72811.1 | MSMEG_2174 | MSMEG_2539 | Superfamily protein I DNA or RNA helicase. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.816 |
| ABK69666.1 | ABK73791.1 | MSMEG_2174 | MSMEG_2254 | Superfamily protein I DNA or RNA helicase. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.843 |
| ABK69666.1 | ABK74204.1 | MSMEG_2174 | MSMEG_6241 | Superfamily protein I DNA or RNA helicase. | ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728. | 0.780 |
| ABK69666.1 | rpoA | MSMEG_2174 | MSMEG_1524 | Superfamily protein I DNA or RNA helicase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
| ABK69666.1 | rpoB | MSMEG_2174 | MSMEG_1367 | Superfamily protein I DNA or RNA helicase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.981 |
| ABK69666.1 | rpoC | MSMEG_2174 | MSMEG_1368 | Superfamily protein I DNA or RNA helicase. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.976 |
| ABK69666.1 | rpoZ | MSMEG_2174 | MSMEG_3053 | Superfamily protein I DNA or RNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.934 |
| ABK69940.1 | ABK69666.1 | MSMEG_4708 | MSMEG_2174 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Superfamily protein I DNA or RNA helicase. | 0.815 |
| ABK69940.1 | ABK72024.1 | MSMEG_4708 | MSMEG_2252 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.862 |
| ABK69940.1 | ABK72811.1 | MSMEG_4708 | MSMEG_2539 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.829 |
| ABK69940.1 | ABK73791.1 | MSMEG_4708 | MSMEG_2254 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.817 |
| ABK69940.1 | ABK74204.1 | MSMEG_4708 | MSMEG_6241 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728. | 0.822 |
| ABK71560.1 | ABK69666.1 | MSMEG_2176 | MSMEG_2174 | Conserved hypothetical protein. | Superfamily protein I DNA or RNA helicase. | 0.666 |
| ABK72024.1 | ABK69666.1 | MSMEG_2252 | MSMEG_2174 | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Superfamily protein I DNA or RNA helicase. | 0.816 |
| ABK72024.1 | ABK69940.1 | MSMEG_2252 | MSMEG_4708 | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Putative methyltransferase; Identified by match to protein family HMM PF05401. | 0.862 |
| ABK72024.1 | ABK72811.1 | MSMEG_2252 | MSMEG_2539 | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.816 |
| ABK72024.1 | ABK73791.1 | MSMEG_2252 | MSMEG_2254 | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.819 |
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