Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70734.1 | ABK73468.1 | MSMEG_6624 | MSMEG_4431 | Conserved hypothetical protein. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.599 |
ABK70734.1 | ABK74149.1 | MSMEG_6624 | MSMEG_2179 | Conserved hypothetical protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.575 |
ABK70734.1 | ABK74743.1 | MSMEG_6624 | MSMEG_6625 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00903. | 0.895 |
ABK70734.1 | ABK75647.1 | MSMEG_6624 | MSMEG_4156 | Conserved hypothetical protein. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.731 |
ABK71204.1 | ABK71245.1 | MSMEG_0391 | MSMEG_3429 | Rmt3 protein. | O-acyl transferase; Identified by match to protein family HMM PF01757. | 0.747 |
ABK71204.1 | ABK73468.1 | MSMEG_0391 | MSMEG_4431 | Rmt3 protein. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.721 |
ABK71204.1 | ABK73794.1 | MSMEG_0391 | MSMEG_6890 | Rmt3 protein. | Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992. | 0.481 |
ABK71204.1 | ABK73813.1 | MSMEG_0391 | MSMEG_6680 | Rmt3 protein. | Integral membrane protein; Identified by match to protein family HMM PF04224. | 0.635 |
ABK71204.1 | ABK74149.1 | MSMEG_0391 | MSMEG_2179 | Rmt3 protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.653 |
ABK71204.1 | ABK74743.1 | MSMEG_0391 | MSMEG_6625 | Rmt3 protein. | Identified by match to protein family HMM PF00903. | 0.682 |
ABK71204.1 | ABK75432.1 | MSMEG_0391 | MSMEG_0390 | Rmt3 protein. | Putative acyltransferase; Identified by match to protein family HMM PF01757. | 0.862 |
ABK71204.1 | ABK75647.1 | MSMEG_0391 | MSMEG_4156 | Rmt3 protein. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.480 |
ABK71245.1 | ABK71204.1 | MSMEG_3429 | MSMEG_0391 | O-acyl transferase; Identified by match to protein family HMM PF01757. | Rmt3 protein. | 0.747 |
ABK71245.1 | ABK73468.1 | MSMEG_3429 | MSMEG_4431 | O-acyl transferase; Identified by match to protein family HMM PF01757. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.404 |
ABK71245.1 | ABK74149.1 | MSMEG_3429 | MSMEG_2179 | O-acyl transferase; Identified by match to protein family HMM PF01757. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.593 |
ABK72339.1 | ABK74149.1 | MSMEG_2178 | MSMEG_2179 | Integral membrane protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.575 |
ABK73468.1 | ABK70734.1 | MSMEG_4431 | MSMEG_6624 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Conserved hypothetical protein. | 0.599 |
ABK73468.1 | ABK71204.1 | MSMEG_4431 | MSMEG_0391 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Rmt3 protein. | 0.721 |
ABK73468.1 | ABK71245.1 | MSMEG_4431 | MSMEG_3429 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | O-acyl transferase; Identified by match to protein family HMM PF01757. | 0.404 |
ABK73468.1 | ABK73794.1 | MSMEG_4431 | MSMEG_6890 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992. | 0.735 |
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