Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69924.1 | ABK72093.1 | MSMEG_2182 | MSMEG_0855 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | 0.446 |
ABK69924.1 | ABK74602.1 | MSMEG_2182 | MSMEG_3763 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | 0.517 |
ABK69924.1 | ABK75208.1 | MSMEG_2182 | MSMEG_2180 | Transcriptional regulator; Identified by match to protein family HMM PF00440. | RemK protein. | 0.792 |
ABK72093.1 | ABK69924.1 | MSMEG_0855 | MSMEG_2182 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.446 |
ABK72093.1 | ABK75208.1 | MSMEG_0855 | MSMEG_2180 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | RemK protein. | 0.472 |
ABK74602.1 | ABK69924.1 | MSMEG_3763 | MSMEG_2182 | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | Transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.517 |
ABK75208.1 | ABK69924.1 | MSMEG_2180 | MSMEG_2182 | RemK protein. | Transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.792 |
ABK75208.1 | ABK72093.1 | MSMEG_2180 | MSMEG_0855 | RemK protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | 0.472 |