Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69944.1 | ABK71838.1 | MSMEG_5642 | MSMEG_2194 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.470 |
| ABK69944.1 | accD | MSMEG_5642 | MSMEG_2169 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.997 |
| ABK70244.1 | ABK71838.1 | MSMEG_2192 | MSMEG_2194 | Conserved hypothetical protein. | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.646 |
| ABK71838.1 | ABK69944.1 | MSMEG_2194 | MSMEG_5642 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 0.470 |
| ABK71838.1 | ABK70244.1 | MSMEG_2194 | MSMEG_2192 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Conserved hypothetical protein. | 0.646 |
| ABK71838.1 | ABK71940.1 | MSMEG_2194 | MSMEG_1116 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Gamma-glutamylisopropylamide synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.447 |
| ABK71838.1 | ABK74955.1 | MSMEG_2194 | MSMEG_2752 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.446 |
| ABK71838.1 | ABK76235.1 | MSMEG_2194 | MSMEG_5374 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Glutamate--ammonia ligase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.447 |
| ABK71838.1 | accD | MSMEG_2194 | MSMEG_2169 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.492 |
| ABK71838.1 | dnaJ | MSMEG_2194 | MSMEG_0711 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.597 |
| ABK71838.1 | dnaJ-2 | MSMEG_2194 | MSMEG_4504 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.597 |
| ABK71838.1 | glnA | MSMEG_2194 | MSMEG_3561 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.448 |
| ABK71838.1 | glnA-2 | MSMEG_2194 | MSMEG_4290 | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | Glutamine synthetase, type I; Involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family. | 0.517 |
| ABK71940.1 | ABK71838.1 | MSMEG_1116 | MSMEG_2194 | Gamma-glutamylisopropylamide synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.447 |
| ABK71940.1 | ABK76235.1 | MSMEG_1116 | MSMEG_5374 | Gamma-glutamylisopropylamide synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glutamate--ammonia ligase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.708 |
| ABK71940.1 | glnA | MSMEG_1116 | MSMEG_3561 | Gamma-glutamylisopropylamide synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.734 |
| ABK71940.1 | glnA-2 | MSMEG_1116 | MSMEG_4290 | Gamma-glutamylisopropylamide synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glutamine synthetase, type I; Involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family. | 0.738 |
| ABK74955.1 | ABK71838.1 | MSMEG_2752 | MSMEG_2194 | Sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | MerR-family protein transcriptional regulator; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739. | 0.446 |
| ABK74955.1 | dnaJ | MSMEG_2752 | MSMEG_0711 | Sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.501 |
| ABK74955.1 | dnaJ-2 | MSMEG_2752 | MSMEG_4504 | Sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.498 |
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