STRINGSTRING
ABK72055.1 ABK72055.1 ABK70676.1 ABK70676.1 ABK72333.1 ABK72333.1 ABK75594.1 ABK75594.1 ABK76006.1 ABK76006.1 ABK74848.1 ABK74848.1 ABK73531.1 ABK73531.1 ABK70546.1 ABK70546.1 ABK75460.1 ABK75460.1 ABK70702.1 ABK70702.1 ABK72357.1 ABK72357.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72055.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (233 aa)    
Predicted Functional Partners:
ABK70676.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
   
0.836
ABK72333.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.548
ABK75594.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.538
ABK76006.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.503
ABK74848.1
Identified by match to protein family HMM PF00903.
  
    0.501
ABK73531.1
Conserved hypothetical protein.
  
    0.497
ABK70546.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.475
ABK75460.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.446
ABK70702.1
Conserved hypothetical protein.
  
    0.446
ABK72357.1
Conserved hypothetical protein.
  
    0.438
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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