STRINGSTRING
ABK69795.1 ABK69795.1 ABK70079.1 ABK70079.1 ABK73891.1 ABK73891.1 ABK73722.1 ABK73722.1 ABK74782.1 ABK74782.1 ABK70966.1 ABK70966.1 ABK69917.1 ABK69917.1 ABK74564.1 ABK74564.1 ABK70103.1 ABK70103.1 ABK75114.1 ABK75114.1 ABK73256.1 ABK73256.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69795.1Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. (265 aa)    
Predicted Functional Partners:
ABK70079.1
carnitinyl-CoA dehydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.841
ABK73891.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441.
 
  0.792
ABK73722.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.759
ABK74782.1
Identified by match to protein family HMM PF04909.
 
    0.758
ABK70966.1
acyl-CoA dehydrogenase, middle domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
  0.751
ABK69917.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
  
    0.750
ABK74564.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
 
    0.744
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK75114.1
Carveol dehydrogenase ((+)-trans-carveol dehydrogenase); Identified by match to protein family HMM PF00106.
  
    0.726
ABK73256.1
L-xylulose reductase; Identified by match to protein family HMM PF00106.
  
    0.726
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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