STRINGSTRING
ABK72341.1 ABK72341.1 ABK74447.1 ABK74447.1 ABK69681.1 ABK69681.1 ABK70684.1 ABK70684.1 ABK75074.1 ABK75074.1 tuf tuf ABK72643.1 ABK72643.1 ABK70099.1 ABK70099.1 ABK70243.1 ABK70243.1 ABK70814.1 ABK70814.1 ABK73835.1 ABK73835.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK72341.1Anaerobic dehydrogenase, typically; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (760 aa)    
Predicted Functional Partners:
ABK74447.1
4Fe-4S ferredoxin, iron-sulfur binding protein; Identified by match to protein family HMM PF00037.
  
 
 0.840
ABK69681.1
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 0.789
ABK70684.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
 
  
 0.782
ABK75074.1
Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.
  
 
 0.725
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.709
ABK72643.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
  
 0.652
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
 
 0.623
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
 
 0.619
ABK70814.1
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.606
ABK73835.1
Putative thiolase; Identified by match to protein family HMM PF02803; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.594
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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