Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69790.1 | ABK70260.1 | MSMEG_5922 | MSMEG_4952 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.654 |
ABK69790.1 | ABK70948.1 | MSMEG_5922 | MSMEG_0718 | Lipid-transfer protein. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.419 |
ABK69790.1 | ABK71396.1 | MSMEG_5922 | MSMEG_5908 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.743 |
ABK69790.1 | ABK75593.1 | MSMEG_5922 | MSMEG_2241 | Lipid-transfer protein. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.760 |
ABK70260.1 | ABK69790.1 | MSMEG_4952 | MSMEG_5922 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Lipid-transfer protein. | 0.654 |
ABK70260.1 | ABK70948.1 | MSMEG_4952 | MSMEG_0718 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.622 |
ABK70260.1 | ABK71774.1 | MSMEG_4952 | MSMEG_6392 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.784 |
ABK70260.1 | ABK75593.1 | MSMEG_4952 | MSMEG_2241 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.829 |
ABK70768.1 | ABK70948.1 | MSMEG_4774 | MSMEG_0718 | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.631 |
ABK70768.1 | ABK71774.1 | MSMEG_4774 | MSMEG_6392 | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.731 |
ABK70768.1 | ABK75593.1 | MSMEG_4774 | MSMEG_2241 | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.732 |
ABK70948.1 | ABK69790.1 | MSMEG_0718 | MSMEG_5922 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Lipid-transfer protein. | 0.419 |
ABK70948.1 | ABK70260.1 | MSMEG_0718 | MSMEG_4952 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.622 |
ABK70948.1 | ABK70768.1 | MSMEG_0718 | MSMEG_4774 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | 0.631 |
ABK70948.1 | ABK71396.1 | MSMEG_0718 | MSMEG_5908 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.625 |
ABK70948.1 | ABK72218.1 | MSMEG_0718 | MSMEG_2215 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.626 |
ABK70948.1 | ABK75424.1 | MSMEG_0718 | MSMEG_3468 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.630 |
ABK70948.1 | ABK75593.1 | MSMEG_0718 | MSMEG_2241 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.821 |
ABK71396.1 | ABK69790.1 | MSMEG_5908 | MSMEG_5922 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Lipid-transfer protein. | 0.743 |
ABK71396.1 | ABK70948.1 | MSMEG_5908 | MSMEG_0718 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.625 |
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