STRINGSTRING
ABK72024.1 ABK72024.1 ABK69940.1 ABK69940.1 ABK73791.1 ABK73791.1 ABK69666.1 ABK69666.1 ABK72811.1 ABK72811.1 ABK74204.1 ABK74204.1 ABK73922.1 ABK73922.1 ABK70454.1 ABK70454.1 ABK71231.1 ABK71231.1 ABK73869.1 ABK73869.1 ABK71145.1 ABK71145.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72024.1Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. (494 aa)    
Predicted Functional Partners:
ABK69940.1
Putative methyltransferase; Identified by match to protein family HMM PF05401.
   
 
 0.862
ABK73791.1
Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883.
  
  
 0.819
ABK69666.1
Superfamily protein I DNA or RNA helicase.
   
  
 0.816
ABK72811.1
Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724.
   
  
 0.816
ABK74204.1
ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728.
   
  
 0.816
ABK73922.1
Oxygenase.
  
    0.624
ABK70454.1
Rifampin ADP-ribosyl transferase.
     
 0.605
ABK71231.1
Rifampin ADP-ribosyl transferase.
     
 0.601
ABK73869.1
Nitrate/nitrite response regulator protein; Identified by match to protein family HMM PF00072.
     
 0.596
ABK71145.1
Fatty acid hydroxylase; Identified by match to protein family HMM PF04116.
   
 
 0.520
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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