Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69666.1 | ABK69940.1 | MSMEG_2174 | MSMEG_4708 | Superfamily protein I DNA or RNA helicase. | Putative methyltransferase; Identified by match to protein family HMM PF05401. | 0.815 |
ABK69666.1 | ABK70454.1 | MSMEG_2174 | MSMEG_1224 | Superfamily protein I DNA or RNA helicase. | Rifampin ADP-ribosyl transferase. | 0.588 |
ABK69666.1 | ABK71231.1 | MSMEG_2174 | MSMEG_1221 | Superfamily protein I DNA or RNA helicase. | Rifampin ADP-ribosyl transferase. | 0.531 |
ABK69666.1 | ABK72024.1 | MSMEG_2174 | MSMEG_2252 | Superfamily protein I DNA or RNA helicase. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.816 |
ABK69666.1 | ABK72811.1 | MSMEG_2174 | MSMEG_2539 | Superfamily protein I DNA or RNA helicase. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.816 |
ABK69666.1 | ABK73791.1 | MSMEG_2174 | MSMEG_2254 | Superfamily protein I DNA or RNA helicase. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.843 |
ABK69666.1 | ABK74204.1 | MSMEG_2174 | MSMEG_6241 | Superfamily protein I DNA or RNA helicase. | ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728. | 0.780 |
ABK69940.1 | ABK69666.1 | MSMEG_4708 | MSMEG_2174 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Superfamily protein I DNA or RNA helicase. | 0.815 |
ABK69940.1 | ABK72024.1 | MSMEG_4708 | MSMEG_2252 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.862 |
ABK69940.1 | ABK72811.1 | MSMEG_4708 | MSMEG_2539 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.829 |
ABK69940.1 | ABK73791.1 | MSMEG_4708 | MSMEG_2254 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.817 |
ABK69940.1 | ABK74204.1 | MSMEG_4708 | MSMEG_6241 | Putative methyltransferase; Identified by match to protein family HMM PF05401. | ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728. | 0.822 |
ABK70454.1 | ABK69666.1 | MSMEG_1224 | MSMEG_2174 | Rifampin ADP-ribosyl transferase. | Superfamily protein I DNA or RNA helicase. | 0.588 |
ABK70454.1 | ABK72024.1 | MSMEG_1224 | MSMEG_2252 | Rifampin ADP-ribosyl transferase. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.605 |
ABK70454.1 | ABK72811.1 | MSMEG_1224 | MSMEG_2539 | Rifampin ADP-ribosyl transferase. | Thiopurine S-methyltransferase (tpmt) superfamily protein; Identified by match to protein family HMM PF05724. | 0.598 |
ABK70454.1 | ABK73791.1 | MSMEG_1224 | MSMEG_2254 | Rifampin ADP-ribosyl transferase. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.586 |
ABK71145.1 | ABK72024.1 | MSMEG_3529 | MSMEG_2252 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.520 |
ABK71145.1 | ABK73922.1 | MSMEG_3529 | MSMEG_0849 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Oxygenase. | 0.517 |
ABK71231.1 | ABK69666.1 | MSMEG_1221 | MSMEG_2174 | Rifampin ADP-ribosyl transferase. | Superfamily protein I DNA or RNA helicase. | 0.531 |
ABK71231.1 | ABK72024.1 | MSMEG_1221 | MSMEG_2252 | Rifampin ADP-ribosyl transferase. | Flavin-type hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.601 |
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