STRINGSTRING
ABK72715.1 ABK72715.1 hybA hybA hybC hybC ABK72538.1 ABK72538.1 hypA-2 hypA-2 ABK70998.1 ABK70998.1 ABK71232.1 ABK71232.1 ABK69740.1 ABK69740.1 ABK73120.1 ABK73120.1 ABK73830.1 ABK73830.1 ABK72373.1 ABK72373.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72715.1Hypothetical protein; Identified by Glimmer2; putative. (189 aa)    
Predicted Functional Partners:
hybA
Hydrogenase-2, small subunit; Identified by match to protein family HMM PF01058.
  
 
 0.963
hybC
Hydrogenase-2, large subunit; Identified by match to protein family HMM PF00374.
  
 
 0.912
ABK72538.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00355; match to protein family HMM PF01106.
  
  
 0.845
hypA-2
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
  
 0.829
ABK70998.1
Iron-sulfur cluster-binding protein, Rieske family protein, putative; Identified by match to protein family HMM PF01106.
  
  
 0.825
ABK71232.1
Conserved hypothetical protein.
   
  
 0.758
ABK69740.1
Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510.
   
  
 0.752
ABK73120.1
Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591.
  
  
 0.627
ABK73830.1
Nitrate reductase NarB; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.625
ABK72373.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00165.
  
    0.540
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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