Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70069.1 | ABK74359.1 | MSMEG_2767 | MSMEG_2341 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.406 |
ABK70481.1 | ABK74359.1 | MSMEG_3684 | MSMEG_2341 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.628 |
ABK70725.1 | ABK72670.1 | MSMEG_2346 | MSMEG_2344 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.882 |
ABK70725.1 | ABK74359.1 | MSMEG_2346 | MSMEG_2341 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Conserved hypothetical protein. | 0.565 |
ABK70725.1 | ABK74893.1 | MSMEG_2346 | MSMEG_2343 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Methylesterase; Identified by match to protein family HMM PF00355. | 0.874 |
ABK70725.1 | ABK74949.1 | MSMEG_2346 | MSMEG_2347 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.999 |
ABK72670.1 | ABK70725.1 | MSMEG_2344 | MSMEG_2346 | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.882 |
ABK72670.1 | ABK74359.1 | MSMEG_2344 | MSMEG_2341 | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | Conserved hypothetical protein. | 0.897 |
ABK72670.1 | ABK74893.1 | MSMEG_2344 | MSMEG_2343 | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | Methylesterase; Identified by match to protein family HMM PF00355. | 0.990 |
ABK72670.1 | ABK74949.1 | MSMEG_2344 | MSMEG_2347 | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.756 |
ABK74359.1 | ABK70069.1 | MSMEG_2341 | MSMEG_2767 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.406 |
ABK74359.1 | ABK70481.1 | MSMEG_2341 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.628 |
ABK74359.1 | ABK70725.1 | MSMEG_2341 | MSMEG_2346 | Conserved hypothetical protein. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.565 |
ABK74359.1 | ABK72670.1 | MSMEG_2341 | MSMEG_2344 | Conserved hypothetical protein. | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.897 |
ABK74359.1 | ABK74893.1 | MSMEG_2341 | MSMEG_2343 | Conserved hypothetical protein. | Methylesterase; Identified by match to protein family HMM PF00355. | 0.896 |
ABK74359.1 | ABK74949.1 | MSMEG_2341 | MSMEG_2347 | Conserved hypothetical protein. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.621 |
ABK74359.1 | ABK75312.1 | MSMEG_2341 | MSMEG_3848 | Conserved hypothetical protein. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.559 |
ABK74359.1 | aroK | MSMEG_2341 | MSMEG_0453 | Conserved hypothetical protein. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.560 |
ABK74893.1 | ABK70725.1 | MSMEG_2343 | MSMEG_2346 | Methylesterase; Identified by match to protein family HMM PF00355. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.874 |
ABK74893.1 | ABK72670.1 | MSMEG_2343 | MSMEG_2344 | Methylesterase; Identified by match to protein family HMM PF00355. | Dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. | 0.990 |
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