Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71094.1 | ABK74802.1 | MSMEG_1823 | MSMEG_2359 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.715 |
| ABK71094.1 | ABK76099.1 | MSMEG_1823 | MSMEG_2581 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | Acetyltransferase; Identified by match to protein family HMM PF00583. | 0.661 |
| ABK72465.1 | ABK73488.1 | MSMEG_6649 | MSMEG_6664 | Conserved hypothetical protein. | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | 0.781 |
| ABK72465.1 | ABK74802.1 | MSMEG_6649 | MSMEG_2359 | Conserved hypothetical protein. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.688 |
| ABK72465.1 | metH | MSMEG_6649 | MSMEG_4185 | Conserved hypothetical protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.943 |
| ABK72465.1 | metK | MSMEG_6649 | MSMEG_3055 | Conserved hypothetical protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.615 |
| ABK73310.1 | ABK74802.1 | MSMEG_6167 | MSMEG_2359 | Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.669 |
| ABK73310.1 | ABK76099.1 | MSMEG_6167 | MSMEG_2581 | Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482. | Acetyltransferase; Identified by match to protein family HMM PF00583. | 0.594 |
| ABK73488.1 | ABK72465.1 | MSMEG_6664 | MSMEG_6649 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Conserved hypothetical protein. | 0.781 |
| ABK73488.1 | ABK74802.1 | MSMEG_6664 | MSMEG_2359 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.787 |
| ABK73488.1 | ABK74965.1 | MSMEG_6664 | MSMEG_6596 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Conserved hypothetical protein. | 0.782 |
| ABK73488.1 | metH | MSMEG_6664 | MSMEG_4185 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.997 |
| ABK73488.1 | metK | MSMEG_6664 | MSMEG_3055 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.712 |
| ABK74642.1 | ABK74802.1 | MSMEG_2357 | MSMEG_2359 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | 0.751 |
| ABK74642.1 | trmU | MSMEG_2357 | MSMEG_2358 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.910 |
| ABK74802.1 | ABK71094.1 | MSMEG_2359 | MSMEG_1823 | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR03089. | 0.715 |
| ABK74802.1 | ABK72465.1 | MSMEG_2359 | MSMEG_6649 | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | Conserved hypothetical protein. | 0.688 |
| ABK74802.1 | ABK73310.1 | MSMEG_2359 | MSMEG_6167 | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482. | 0.669 |
| ABK74802.1 | ABK73488.1 | MSMEG_2359 | MSMEG_6664 | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | 0.787 |
| ABK74802.1 | ABK74642.1 | MSMEG_2359 | MSMEG_2357 | Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212. | 0.751 |
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