Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69850.1 | ABK70567.1 | MSMEG_1774 | MSMEG_2376 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
ABK69850.1 | ABK75409.1 | MSMEG_1774 | MSMEG_6728 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.681 |
ABK70567.1 | ABK69850.1 | MSMEG_2376 | MSMEG_1774 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
ABK70567.1 | ABK71971.1 | MSMEG_2376 | MSMEG_2377 | Conserved hypothetical protein. | P49 protein. | 0.713 |
ABK70567.1 | ABK72401.1 | MSMEG_2376 | MSMEG_1358 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.537 |
ABK70567.1 | ABK72860.1 | MSMEG_2376 | MSMEG_5401 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.584 |
ABK70567.1 | ABK75350.1 | MSMEG_2376 | MSMEG_3312 | Conserved hypothetical protein. | Hemerythrin HHE cation binding domain subfamily protein, putative; Identified by match to protein family HMM PF01814. | 0.406 |
ABK70567.1 | ABK75409.1 | MSMEG_2376 | MSMEG_6728 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.630 |
ABK70567.1 | ABK75641.1 | MSMEG_2376 | MSMEG_0375 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00614. | 0.465 |
ABK70567.1 | leuB | MSMEG_2376 | MSMEG_2379 | Conserved hypothetical protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.512 |
ABK70567.1 | serA | MSMEG_2376 | MSMEG_2378 | Conserved hypothetical protein. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.568 |
ABK70567.1 | wrbA | MSMEG_2376 | MSMEG_2375 | Conserved hypothetical protein. | NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; Belongs to the WrbA family. | 0.700 |
ABK71971.1 | ABK70567.1 | MSMEG_2377 | MSMEG_2376 | P49 protein. | Conserved hypothetical protein. | 0.713 |
ABK71971.1 | leuB | MSMEG_2377 | MSMEG_2379 | P49 protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.628 |
ABK71971.1 | serA | MSMEG_2377 | MSMEG_2378 | P49 protein. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.630 |
ABK71971.1 | wrbA | MSMEG_2377 | MSMEG_2375 | P49 protein. | NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; Belongs to the WrbA family. | 0.653 |
ABK72401.1 | ABK70567.1 | MSMEG_1358 | MSMEG_2376 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.537 |
ABK72860.1 | ABK70567.1 | MSMEG_5401 | MSMEG_2376 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.584 |
ABK75350.1 | ABK70567.1 | MSMEG_3312 | MSMEG_2376 | Hemerythrin HHE cation binding domain subfamily protein, putative; Identified by match to protein family HMM PF01814. | Conserved hypothetical protein. | 0.406 |
ABK75409.1 | ABK69850.1 | MSMEG_6728 | MSMEG_1774 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.681 |
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