Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70567.1 | ABK71971.1 | MSMEG_2376 | MSMEG_2377 | Conserved hypothetical protein. | P49 protein. | 0.713 |
| ABK70567.1 | leuB | MSMEG_2376 | MSMEG_2379 | Conserved hypothetical protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.512 |
| ABK70567.1 | serA | MSMEG_2376 | MSMEG_2378 | Conserved hypothetical protein. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.568 |
| ABK70567.1 | wrbA | MSMEG_2376 | MSMEG_2375 | Conserved hypothetical protein. | NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; Belongs to the WrbA family. | 0.700 |
| ABK70725.1 | ABK71971.1 | MSMEG_2346 | MSMEG_2377 | Phytoene synthase; Identified by match to protein family HMM PF00494. | P49 protein. | 0.658 |
| ABK70725.1 | ABK72276.1 | MSMEG_2346 | MSMEG_2615 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.736 |
| ABK70725.1 | ABK73730.1 | MSMEG_2346 | MSMEG_5512 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Magnesium chelatase. | 0.471 |
| ABK70725.1 | cobN | MSMEG_2346 | MSMEG_3864 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.583 |
| ABK71497.1 | ABK71971.1 | MSMEG_0671 | MSMEG_2377 | S-(hydroxymethyl)glutathione dehydrogenase; Identified by match to protein family HMM PF00107. | P49 protein. | 0.418 |
| ABK71971.1 | ABK70567.1 | MSMEG_2377 | MSMEG_2376 | P49 protein. | Conserved hypothetical protein. | 0.713 |
| ABK71971.1 | ABK70725.1 | MSMEG_2377 | MSMEG_2346 | P49 protein. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.658 |
| ABK71971.1 | ABK71497.1 | MSMEG_2377 | MSMEG_0671 | P49 protein. | S-(hydroxymethyl)glutathione dehydrogenase; Identified by match to protein family HMM PF00107. | 0.418 |
| ABK71971.1 | ABK72276.1 | MSMEG_2377 | MSMEG_2615 | P49 protein. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.534 |
| ABK71971.1 | ABK72684.1 | MSMEG_2377 | MSMEG_1761 | P49 protein. | Integral membrane protein; Identified by match to protein family HMM PF06762. | 0.421 |
| ABK71971.1 | ABK73730.1 | MSMEG_2377 | MSMEG_5512 | P49 protein. | Magnesium chelatase. | 0.432 |
| ABK71971.1 | cobN | MSMEG_2377 | MSMEG_3864 | P49 protein. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.443 |
| ABK71971.1 | leuB | MSMEG_2377 | MSMEG_2379 | P49 protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.628 |
| ABK71971.1 | serA | MSMEG_2377 | MSMEG_2378 | P49 protein. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.630 |
| ABK71971.1 | wrbA | MSMEG_2377 | MSMEG_2375 | P49 protein. | NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; Belongs to the WrbA family. | 0.653 |
| ABK72276.1 | ABK70725.1 | MSMEG_2615 | MSMEG_2346 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.736 |
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