node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69728.1 | ABK70573.1 | MSMEG_2416 | MSMEG_2417 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | 0.978 |
ABK69728.1 | mutM | MSMEG_2416 | MSMEG_2419 | Conserved hypothetical protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | 0.708 |
ABK69728.1 | rnc | MSMEG_2416 | MSMEG_2418 | Conserved hypothetical protein. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.899 |
ABK70573.1 | ABK69728.1 | MSMEG_2417 | MSMEG_2416 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Conserved hypothetical protein. | 0.978 |
ABK70573.1 | mutM | MSMEG_2417 | MSMEG_2419 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | 0.922 |
ABK70573.1 | rnc | MSMEG_2417 | MSMEG_2418 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.970 |
ABK70573.1 | rplA | MSMEG_2417 | MSMEG_1347 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.855 |
ABK70573.1 | rplK | MSMEG_2417 | MSMEG_1346 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.857 |
ABK70573.1 | rpmB | MSMEG_2417 | MSMEG_2400 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | 0.861 |
ABK70573.1 | rpmF | MSMEG_2417 | MSMEG_5489 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family. | 0.891 |
ABK70573.1 | rpsB | MSMEG_2417 | MSMEG_2519 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.844 |
ABK70573.1 | rpsC | MSMEG_2417 | MSMEG_1442 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.904 |
ABK70573.1 | rpsF | MSMEG_2417 | MSMEG_6897 | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.845 |
mutM | ABK69728.1 | MSMEG_2419 | MSMEG_2416 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | Conserved hypothetical protein. | 0.708 |
mutM | ABK70573.1 | MSMEG_2419 | MSMEG_2417 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | 0.922 |
mutM | rnc | MSMEG_2419 | MSMEG_2418 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | 0.906 |
rnc | ABK69728.1 | MSMEG_2418 | MSMEG_2416 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Conserved hypothetical protein. | 0.899 |
rnc | ABK70573.1 | MSMEG_2418 | MSMEG_2417 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Conserved hypothetical protein; Identified by match to protein family HMM PF02620. | 0.970 |
rnc | mutM | MSMEG_2418 | MSMEG_2419 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family. | 0.906 |
rnc | rplA | MSMEG_2418 | MSMEG_1347 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity). | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.513 |