STRINGSTRING
ABK72613.1 ABK72613.1 ABK71653.1 ABK71653.1 acyP acyP smc smc ABK70019.1 ABK70019.1 ABK75474.1 ABK75474.1 ABK73103.1 ABK73103.1 ABK73620.1 ABK73620.1 ABK75173.1 ABK75173.1 ABK70321.1 ABK70321.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72613.1Hypothetical protein; Identified by Glimmer2; putative. (258 aa)    
Predicted Functional Partners:
ABK71653.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02566.
  
  
 0.574
acyP
Acylphosphatase; Identified by match to protein family HMM PF00708.
  
    0.546
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.508
ABK70019.1
Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814.
  
 
 0.493
ABK75474.1
Conserved hypothetical protein.
  
     0.468
ABK73103.1
Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
  
  
 0.447
ABK73620.1
Conserved hypothetical protein.
 
     0.435
ABK75173.1
Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
 
    0.419
ABK70321.1
Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724.
 
    0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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