STRINGSTRING
ABK71653.1 ABK71653.1 acyP acyP smc smc ftsY ftsY ABK70748.1 ABK70748.1 ABK69728.1 ABK69728.1 ABK72250.1 ABK72250.1 ABK70534.1 ABK70534.1 ABK72613.1 ABK72613.1 ABK70573.1 ABK70573.1 rnc rnc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71653.1Conserved hypothetical protein; Identified by match to protein family HMM PF02566. (139 aa)    
Predicted Functional Partners:
acyP
Acylphosphatase; Identified by match to protein family HMM PF00708.
  
    0.897
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.853
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
  
    0.774
ABK70748.1
Conserved hypothetical protein.
  
     0.667
ABK69728.1
Conserved hypothetical protein.
 
    0.655
ABK72250.1
Conserved hypothetical protein.
 
     0.622
ABK70534.1
Conserved hypothetical protein.
      
 0.587
ABK72613.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.574
ABK70573.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02620.
  
    0.568
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the all rRNAs (23S, 16S and 5S) (Probable). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism (By similarity).
  
    0.563
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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