Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70168.1 | ABK71878.1 | MSMEG_4455 | MSMEG_2433 | Beta-lactamase; Identified by match to protein family HMM PF00144. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.548 |
| ABK70168.1 | ABK73008.1 | MSMEG_4455 | MSMEG_6112 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.606 |
| ABK70168.1 | ABK73230.1 | MSMEG_4455 | MSMEG_1661 | Beta-lactamase; Identified by match to protein family HMM PF00144. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.559 |
| ABK70168.1 | ABK73743.1 | MSMEG_4455 | MSMEG_2432 | Beta-lactamase; Identified by match to protein family HMM PF00144. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.700 |
| ABK70168.1 | ABK75131.1 | MSMEG_4455 | MSMEG_1900 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF02557. | 0.598 |
| ABK70168.1 | dacB | MSMEG_4455 | MSMEG_6113 | Beta-lactamase; Identified by match to protein family HMM PF00144. | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Carboxypeptidase that cleaves terminal D-alanine from peptidoglycan in the mycobacterial cell wall. May cleave L-Lys-D-Ala and/or D-Ala-D-Ala peptide bonds. Exerts important effects on mycobacterial cell morphology and cell division. Belongs to the peptidase S13 family. | 0.836 |
| ABK70790.1 | ABK71878.1 | MSMEG_6201 | MSMEG_2433 | Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.528 |
| ABK70790.1 | dacB | MSMEG_6201 | MSMEG_6113 | Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793. | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Carboxypeptidase that cleaves terminal D-alanine from peptidoglycan in the mycobacterial cell wall. May cleave L-Lys-D-Ala and/or D-Ala-D-Ala peptide bonds. Exerts important effects on mycobacterial cell morphology and cell division. Belongs to the peptidase S13 family. | 0.465 |
| ABK71878.1 | ABK70168.1 | MSMEG_2433 | MSMEG_4455 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.548 |
| ABK71878.1 | ABK70790.1 | MSMEG_2433 | MSMEG_6201 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793. | 0.528 |
| ABK71878.1 | ABK72997.1 | MSMEG_2433 | MSMEG_2434 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Conserved hypothetical protein. | 0.586 |
| ABK71878.1 | ABK73008.1 | MSMEG_2433 | MSMEG_6112 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Conserved hypothetical protein. | 0.544 |
| ABK71878.1 | ABK73230.1 | MSMEG_2433 | MSMEG_1661 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.922 |
| ABK71878.1 | ABK73743.1 | MSMEG_2433 | MSMEG_2432 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.963 |
| ABK71878.1 | ABK75131.1 | MSMEG_2433 | MSMEG_1900 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Identified by match to protein family HMM PF02557. | 0.982 |
| ABK71878.1 | asnB | MSMEG_2433 | MSMEG_2594 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; match to protein family HMM TIGR03104. | 0.562 |
| ABK71878.1 | asnB-2 | MSMEG_2433 | MSMEG_4269 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536. | 0.561 |
| ABK71878.1 | dacB | MSMEG_2433 | MSMEG_6113 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Carboxypeptidase that cleaves terminal D-alanine from peptidoglycan in the mycobacterial cell wall. May cleave L-Lys-D-Ala and/or D-Ala-D-Ala peptide bonds. Exerts important effects on mycobacterial cell morphology and cell division. Belongs to the peptidase S13 family. | 0.989 |
| ABK72997.1 | ABK71878.1 | MSMEG_2434 | MSMEG_2433 | Conserved hypothetical protein. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.586 |
| ABK72997.1 | ABK73743.1 | MSMEG_2434 | MSMEG_2432 | Conserved hypothetical protein. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.446 |
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