STRINGSTRING
ABK72997.1 ABK72997.1 ABK74751.1 ABK74751.1 ABK69916.1 ABK69916.1 ABK71878.1 ABK71878.1 ABK75868.1 ABK75868.1 ABK74503.1 ABK74503.1 ABK73925.1 ABK73925.1 ABK72033.1 ABK72033.1 ABK73153.1 ABK73153.1 ABK72706.1 ABK72706.1 ABK73177.1 ABK73177.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72997.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
ABK74751.1
Conserved hypothetical protein.
  
    0.770
ABK69916.1
Conserved hypothetical protein.
  
    0.649
ABK71878.1
D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family.
  
    0.586
ABK75868.1
Conserved hypothetical protein.
 
    0.543
ABK74503.1
Succinate dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
   
 0.539
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
 
  
 0.512
ABK72033.1
Identified by match to protein family HMM PF00106.
 
     0.508
ABK73153.1
Coenzyme A transferase, subunit B.
  
     0.501
ABK72706.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
     0.500
ABK73177.1
Conserved hypothetical protein.
 
     0.484
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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