STRINGSTRING
ABK74518.1 ABK74518.1 ABK70833.1 ABK70833.1 ABK75069.1 ABK75069.1 ABK76158.1 ABK76158.1 ABK75949.1 ABK75949.1 ABK72878.1 ABK72878.1 ABK70087.1 ABK70087.1 ABK74498.1 ABK74498.1 ABK71821.1 ABK71821.1 ABK70637.1 ABK70637.1 ABK76220.1 ABK76220.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74518.1Identified by match to protein family HMM PF07905. (538 aa)    
Predicted Functional Partners:
ABK70833.1
Regulatory protein, putative; Identified by match to protein family HMM PF07905.
 
    0.732
ABK75069.1
Identified by match to protein family HMM PF07905.
  
    0.679
ABK76158.1
Regulator of polyketide synthase expression, putative; Identified by match to protein family HMM PF07905.
  
    0.634
ABK75949.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.627
ABK72878.1
Identified by match to protein family HMM PF07905.
 
     0.623
ABK70087.1
Identified by match to protein family HMM PF00582.
  
     0.621
ABK74498.1
GAF domain protein; Identified by match to protein family HMM PF01590.
 
     0.607
ABK71821.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.606
ABK70637.1
Conserved hypothetical protein.
  
    0.586
ABK76220.1
Regulatory protein.
 
     0.576
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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