STRINGSTRING
ABK72765.1 ABK72765.1 ABK74662.1 ABK74662.1 ABK70589.1 ABK70589.1 ABK74383.1 ABK74383.1 ABK70183.1 ABK70183.1 mmsA-2 mmsA-2 ABK75949.1 ABK75949.1 ABK75945.1 ABK75945.1 ABK72306.1 ABK72306.1 ABK70834.1 ABK70834.1 argB argB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72765.1HAD-superfamily protein hydrolase, subfamily protein IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; Belongs to the HAD-like hydrolase superfamily. (258 aa)    
Predicted Functional Partners:
ABK74662.1
Dihydroxyacetone kinase; Identified by match to protein family HMM PF02734.
  
  
 0.738
ABK70589.1
Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022.
  
    0.674
ABK74383.1
Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022.
  
    0.670
ABK70183.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.651
mmsA-2
Methylmalonate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722.
  
 
 0.601
ABK75949.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.553
ABK75945.1
Identified by match to protein family HMM PF00481.
  
 
 0.453
ABK72306.1
Protein phosphatase 2C; Identified by match to protein family HMM PF00481.
  
 
 0.450
ABK70834.1
RNA polymerase sigma factor, sigma-70 family protein; Identified by match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.440
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
  
 0.440
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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