STRINGSTRING
ABK70183.1 ABK70183.1 ABK72765.1 ABK72765.1 ABK75949.1 ABK75949.1 mmsA-2 mmsA-2 ABK74507.1 ABK74507.1 ABK75963.1 ABK75963.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK70183.1Hypothetical protein; Identified by Glimmer2; putative. (69 aa)    
Predicted Functional Partners:
ABK72765.1
HAD-superfamily protein hydrolase, subfamily protein IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; Belongs to the HAD-like hydrolase superfamily.
  
    0.651
ABK75949.1
Adenosylmethionine--8-amino-7-oxononanoate transaminase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.442
mmsA-2
Methylmalonate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722.
  
    0.427
ABK74507.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
    0.421
ABK75963.1
Translation initiation inhibitor; Identified by match to protein family HMM PF01042.
  
    0.421
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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