STRINGSTRING
ABK72154.1 ABK72154.1 ABK72224.1 ABK72224.1 ABK74297.1 ABK74297.1 ABK74472.1 ABK74472.1 ABK72289.1 ABK72289.1 ABK69710.1 ABK69710.1 ABK74659.1 ABK74659.1 ABK73128.1 ABK73128.1 ABK75536.1 ABK75536.1 ABK71767.1 ABK71767.1 ABK76148.1 ABK76148.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72154.1Hypothetical protein; Identified by Glimmer2; putative. (105 aa)    
Predicted Functional Partners:
ABK72224.1
5,10-methylenetetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296.
  
    0.777
ABK74297.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.665
ABK74472.1
Transporter ATPase; Identified by match to protein family HMM PF00005.
  
    0.582
ABK72289.1
Transporter permease 1; Identified by match to protein family HMM PF00528.
  
    0.580
ABK69710.1
Transporter permease 2, putative; Identified by match to protein family HMM PF00528.
  
    0.580
ABK74659.1
Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
  
    0.580
ABK73128.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
  
    0.580
ABK75536.1
Nicotine dehydrogenase chain A; Identified by match to protein family HMM PF00941.
  
    0.579
ABK71767.1
Carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein; Identified by match to protein family HMM PF06240.
  
    0.553
ABK76148.1
Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
  
    0.455
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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