Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71113.1 | ABK71148.1 | MSMEG_6286 | MSMEG_2487 | Aspartate transaminase; Identified by match to protein family HMM PF00155. | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.818 |
| ABK71113.1 | ABK73567.1 | MSMEG_6286 | MSMEG_0688 | Aspartate transaminase; Identified by match to protein family HMM PF00155. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.625 |
| ABK71148.1 | ABK71113.1 | MSMEG_2487 | MSMEG_6286 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate transaminase; Identified by match to protein family HMM PF00155. | 0.818 |
| ABK71148.1 | ABK72648.1 | MSMEG_2487 | MSMEG_2488 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | [NADP+] succinate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.906 |
| ABK71148.1 | ABK73567.1 | MSMEG_2487 | MSMEG_0688 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.870 |
| ABK71148.1 | ABK75274.1 | MSMEG_2487 | MSMEG_3555 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hydrolase; Identified by match to protein family HMM PF00795. | 0.924 |
| ABK71148.1 | ABK75920.1 | MSMEG_2487 | MSMEG_1574 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family. | 0.935 |
| ABK71148.1 | mmsA | MSMEG_2487 | MSMEG_1498 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Methylmalonate-semialdehyde dehydrogenase; Identified by similarity to GB:AAA99190.1; match to protein family HMM PF00171; match to protein family HMM TIGR01722. | 0.931 |
| ABK71148.1 | mmsA-2 | MSMEG_2487 | MSMEG_2449 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Methylmalonate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722. | 0.932 |
| ABK71148.1 | panC | MSMEG_2487 | MSMEG_6097 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.905 |
| ABK71148.1 | panD | MSMEG_2487 | MSMEG_0021 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.922 |
| ABK71148.1 | speB-2 | MSMEG_2487 | MSMEG_3535 | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.829 |
| ABK72648.1 | ABK71148.1 | MSMEG_2488 | MSMEG_2487 | [NADP+] succinate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
| ABK72648.1 | ABK75920.1 | MSMEG_2488 | MSMEG_1574 | [NADP+] succinate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family. | 0.678 |
| ABK73567.1 | ABK71113.1 | MSMEG_0688 | MSMEG_6286 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | Aspartate transaminase; Identified by match to protein family HMM PF00155. | 0.625 |
| ABK73567.1 | ABK71148.1 | MSMEG_0688 | MSMEG_2487 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.870 |
| ABK73567.1 | ABK75920.1 | MSMEG_0688 | MSMEG_1574 | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family. | 0.487 |
| ABK75274.1 | ABK71148.1 | MSMEG_3555 | MSMEG_2487 | Hydrolase; Identified by match to protein family HMM PF00795. | 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.924 |
| ABK75274.1 | ABK75920.1 | MSMEG_3555 | MSMEG_1574 | Hydrolase; Identified by match to protein family HMM PF00795. | Glutamate decarboxylase; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family. | 0.911 |
| ABK75274.1 | panC | MSMEG_3555 | MSMEG_6097 | Hydrolase; Identified by match to protein family HMM PF00795. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.910 |
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