STRINGSTRING
ABK73694.1 ABK73694.1 ABK71913.1 ABK71913.1 ABK75883.1 ABK75883.1 ABK73701.1 ABK73701.1 ABK70136.1 ABK70136.1 ABK71148.1 ABK71148.1 ehuB ehuB ABK72091.1 ABK72091.1 thpD thpD ABK72164.1 ABK72164.1 ehuB-2 ehuB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73694.1Decarboxylase; Identified by match to protein family HMM PF01177. (209 aa)    
Predicted Functional Partners:
ABK71913.1
Transcriptional regulator, GntR family protein, putative; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
    0.883
ABK75883.1
Conserved hypothetical protein.
 
     0.792
ABK73701.1
Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.722
ABK70136.1
D-lactate dehydrogenase; Identified by match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913.
 
    0.582
ABK71148.1
4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.564
ehuB
Ectoine/hydroxyectoine ABC transporter solute-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM TIGR01409; match to protein family HMM TIGR02995.
 
     0.542
ABK72091.1
Identified by match to protein family HMM PF01425; Belongs to the amidase family.
 
    0.503
thpD
Ectoine hydroxylase; Identified by match to protein family HMM PF05721; match to protein family HMM TIGR02408.
 
     0.485
ABK72164.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
  
    0.474
ehuB-2
Ectoine/hydroxyectoine ABC transporter solute-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM TIGR02995.
 
     0.470
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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