STRINGSTRING
ABK71519.1 ABK71519.1 ABK73893.1 ABK73893.1 ABK75410.1 ABK75410.1 ABK75261.1 ABK75261.1 ABK71606.1 ABK71606.1 ABK72510.1 ABK72510.1 ABK71617.1 ABK71617.1 ABK72509.1 ABK72509.1 ABK73759.1 ABK73759.1 ABK72017.1 ABK72017.1 ABK75522.1 ABK75522.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71519.1Hypothetical protein; Identified by Glimmer2; putative. (278 aa)    
Predicted Functional Partners:
ABK73893.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.654
ABK75410.1
Putative secreted protein.
  
    0.645
ABK75261.1
Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561.
  
    0.615
ABK71606.1
Conserved hypothetical protein.
  
    0.607
ABK72510.1
Periplasmic sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518.
  
    0.564
ABK71617.1
Lactate 2-monooxygenase; Identified by match to protein family HMM PF01070.
  
    0.551
ABK72509.1
Conserved hypothetical protein.
  
    0.508
ABK73759.1
LysM domain protein; Identified by match to protein family HMM PF01476.
  
    0.502
ABK72017.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.501
ABK75522.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05976.
  
     0.501
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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