Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72753.1 | ABK73428.1 | MSMEG_1536 | MSMEG_1537 | Identified by match to protein family HMM PF01580. | Conserved hypothetical protein. | 0.992 |
| ABK72753.1 | ABK74304.1 | MSMEG_1536 | MSMEG_2518 | Identified by match to protein family HMM PF01580. | Peptidase M23B; Identified by match to protein family HMM PF01551. | 0.724 |
| ABK73428.1 | ABK72753.1 | MSMEG_1537 | MSMEG_1536 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01580. | 0.992 |
| ABK73428.1 | ABK74304.1 | MSMEG_1537 | MSMEG_2518 | Conserved hypothetical protein. | Peptidase M23B; Identified by match to protein family HMM PF01551. | 0.689 |
| ABK73428.1 | rpsB | MSMEG_1537 | MSMEG_2519 | Conserved hypothetical protein. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.523 |
| ABK73664.1 | ABK74304.1 | MSMEG_2516 | MSMEG_2518 | Putative oxidoreductase; Identified by match to protein family HMM PF00296. | Peptidase M23B; Identified by match to protein family HMM PF01551. | 0.714 |
| ABK73664.1 | rpsB | MSMEG_2516 | MSMEG_2519 | Putative oxidoreductase; Identified by match to protein family HMM PF00296. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.423 |
| ABK73664.1 | tsf | MSMEG_2516 | MSMEG_2520 | Putative oxidoreductase; Identified by match to protein family HMM PF00296. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.404 |
| ABK74110.1 | ABK74304.1 | MSMEG_1806 | MSMEG_2518 | Conserved hypothetical protein. | Peptidase M23B; Identified by match to protein family HMM PF01551. | 0.438 |
| ABK74304.1 | ABK72753.1 | MSMEG_2518 | MSMEG_1536 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Identified by match to protein family HMM PF01580. | 0.724 |
| ABK74304.1 | ABK73428.1 | MSMEG_2518 | MSMEG_1537 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Conserved hypothetical protein. | 0.689 |
| ABK74304.1 | ABK73664.1 | MSMEG_2518 | MSMEG_2516 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Putative oxidoreductase; Identified by match to protein family HMM PF00296. | 0.714 |
| ABK74304.1 | ABK74110.1 | MSMEG_2518 | MSMEG_1806 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Conserved hypothetical protein. | 0.438 |
| ABK74304.1 | ABK75044.1 | MSMEG_2518 | MSMEG_2521 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.674 |
| ABK74304.1 | ABK76216.1 | MSMEG_2518 | MSMEG_1877 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Conserved hypothetical protein. | 0.477 |
| ABK74304.1 | clgR | MSMEG_2518 | MSMEG_2694 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Transcriptional regulator, XRE family protein; Probably controls the response to vancomycin treatment; vancomycin induces expression of the clp regulon (clpP1, clpP2 and clpC1). | 0.514 |
| ABK74304.1 | disA | MSMEG_2518 | MSMEG_6080 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Conserved hypothetical protein; Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions. Belongs to the DisA family. | 0.607 |
| ABK74304.1 | rpsB | MSMEG_2518 | MSMEG_2519 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.735 |
| ABK74304.1 | tsf | MSMEG_2518 | MSMEG_2520 | Peptidase M23B; Identified by match to protein family HMM PF01551. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.771 |
| ABK75044.1 | ABK74304.1 | MSMEG_2521 | MSMEG_2518 | Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | Peptidase M23B; Identified by match to protein family HMM PF01551. | 0.674 |
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