Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70146.1 | ABK70650.1 | MSMEG_2523 | MSMEG_2525 | Efflux ABC transporter, permease protein, putative; Identified by match to protein family HMM PF02687. | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | 0.609 |
| ABK70146.1 | ABK73920.1 | MSMEG_2523 | MSMEG_2524 | Efflux ABC transporter, permease protein, putative; Identified by match to protein family HMM PF02687. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.971 |
| ABK70650.1 | ABK70146.1 | MSMEG_2525 | MSMEG_2523 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Efflux ABC transporter, permease protein, putative; Identified by match to protein family HMM PF02687. | 0.609 |
| ABK70650.1 | ABK70926.1 | MSMEG_2525 | MSMEG_5730 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Permease for cytosine/purines, uracil, thiamine, allantoin transporter; Identified by match to protein family HMM PF02133. | 0.660 |
| ABK70650.1 | ABK73920.1 | MSMEG_2525 | MSMEG_2524 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.611 |
| ABK70650.1 | ABK74076.1 | MSMEG_2525 | MSMEG_1742 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.818 |
| ABK70650.1 | ABK74343.1 | MSMEG_2525 | MSMEG_3576 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | 0.660 |
| ABK70650.1 | ABK74424.1 | MSMEG_2525 | MSMEG_4696 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00128. | 0.661 |
| ABK70650.1 | ABK74428.1 | MSMEG_2525 | MSMEG_1777 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | UsfY protein. | 0.783 |
| ABK70650.1 | ABK75426.1 | MSMEG_2525 | MSMEG_4329 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039. | 0.694 |
| ABK70650.1 | glgE | MSMEG_2525 | MSMEG_4916 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.660 |
| ABK70650.1 | treS | MSMEG_2525 | MSMEG_6515 | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...] | 0.661 |
| ABK70926.1 | ABK70650.1 | MSMEG_5730 | MSMEG_2525 | Permease for cytosine/purines, uracil, thiamine, allantoin transporter; Identified by match to protein family HMM PF02133. | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | 0.660 |
| ABK73920.1 | ABK70146.1 | MSMEG_2524 | MSMEG_2523 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Efflux ABC transporter, permease protein, putative; Identified by match to protein family HMM PF02687. | 0.971 |
| ABK73920.1 | ABK70650.1 | MSMEG_2524 | MSMEG_2525 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | 0.611 |
| ABK74076.1 | ABK70650.1 | MSMEG_1742 | MSMEG_2525 | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | 0.818 |
| ABK74076.1 | ABK74428.1 | MSMEG_1742 | MSMEG_1777 | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | UsfY protein. | 0.816 |
| ABK74076.1 | ABK75426.1 | MSMEG_1742 | MSMEG_4329 | Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039. | 0.786 |
| ABK74343.1 | ABK70650.1 | MSMEG_3576 | MSMEG_2525 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease superfamily protein; Identified by match to protein family HMM PF00324. | 0.660 |
| ABK74343.1 | ABK74424.1 | MSMEG_3576 | MSMEG_4696 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Identified by match to protein family HMM PF00128. | 0.934 |
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