STRINGSTRING
ABK70542.1 ABK70542.1 ABK73976.1 ABK73976.1 ABK70103.1 ABK70103.1 ABK70443.1 ABK70443.1 ABK71624.1 ABK71624.1 ABK74379.1 ABK74379.1 ABK73658.1 ABK73658.1 ABK75742.1 ABK75742.1 ABK71841.1 ABK71841.1 ABK72199.1 ABK72199.1 ABK70370.1 ABK70370.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70542.1Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. (255 aa)    
Predicted Functional Partners:
ABK73976.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
 
 
0.921
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.743
ABK70443.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
    0.723
ABK71624.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
   
0.720
ABK74379.1
Putative carboxylesterase protein; Identified by match to protein family HMM PF00561.
  
   0.713
ABK73658.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.663
ABK75742.1
Identified by match to protein family HMM PF07690.
  
    0.536
ABK71841.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 0.527
ABK72199.1
Two-component sensor histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.
  
 0.526
ABK70370.1
Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes.
  
 0.518
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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