STRINGSTRING
ABK74292.1 ABK74292.1 ABK74718.1 ABK74718.1 ABK71459.1 ABK71459.1 ABK69534.1 ABK69534.1 ABK73100.1 ABK73100.1 ABK74540.1 ABK74540.1 ABK76121.1 ABK76121.1 ABK73097.1 ABK73097.1 ABK74939.1 ABK74939.1 ABK70765.1 ABK70765.1 ABK73293.1 ABK73293.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74292.1Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107. (322 aa)    
Predicted Functional Partners:
ABK74718.1
4-hydroxy-2-oxovalerate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
    0.917
ABK71459.1
Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
  
 0.909
ABK69534.1
Conserved hypothetical protein.
  
    0.893
ABK73100.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase; Identified by match to protein family HMM PF00106.
 
  
 0.885
ABK74540.1
LipW protein; Identified by match to protein family HMM PF07859.
  
    0.866
ABK76121.1
Gluconolactonase; Identified by match to protein family HMM PF03758.
 
  
 0.771
ABK73097.1
Probable monooxygenase.
  
    0.745
ABK74939.1
Conserved hypothetical protein.
 
    0.669
ABK70765.1
Identified by match to protein family HMM PF04909.
 
    0.662
ABK73293.1
Zinc-binding dehydrogenase; Identified by match to protein family HMM PF00107.
  
     0.631
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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