Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69534.1 | ABK71459.1 | MSMEG_2562 | MSMEG_2563 | Conserved hypothetical protein. | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.893 |
ABK69534.1 | ABK73097.1 | MSMEG_2562 | MSMEG_2567 | Conserved hypothetical protein. | Probable monooxygenase. | 0.722 |
ABK69534.1 | ABK73100.1 | MSMEG_2562 | MSMEG_2566 | Conserved hypothetical protein. | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase; Identified by match to protein family HMM PF00106. | 0.859 |
ABK69534.1 | ABK74292.1 | MSMEG_2562 | MSMEG_2564 | Conserved hypothetical protein. | Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107. | 0.893 |
ABK69534.1 | ABK74540.1 | MSMEG_2562 | MSMEG_2568 | Conserved hypothetical protein. | LipW protein; Identified by match to protein family HMM PF07859. | 0.859 |
ABK69534.1 | ABK74718.1 | MSMEG_2562 | MSMEG_2565 | Conserved hypothetical protein. | 4-hydroxy-2-oxovalerate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.894 |
ABK71459.1 | ABK69534.1 | MSMEG_2563 | MSMEG_2562 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Conserved hypothetical protein. | 0.893 |
ABK71459.1 | ABK73097.1 | MSMEG_2563 | MSMEG_2567 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Probable monooxygenase. | 0.791 |
ABK71459.1 | ABK73100.1 | MSMEG_2563 | MSMEG_2566 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase; Identified by match to protein family HMM PF00106. | 0.884 |
ABK71459.1 | ABK74292.1 | MSMEG_2563 | MSMEG_2564 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107. | 0.909 |
ABK71459.1 | ABK74540.1 | MSMEG_2563 | MSMEG_2568 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | LipW protein; Identified by match to protein family HMM PF07859. | 0.880 |
ABK71459.1 | ABK74718.1 | MSMEG_2563 | MSMEG_2565 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 4-hydroxy-2-oxovalerate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.896 |
ABK71459.1 | ABK76062.1 | MSMEG_2563 | MSMEG_4009 | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.592 |
ABK73097.1 | ABK69534.1 | MSMEG_2567 | MSMEG_2562 | Probable monooxygenase. | Conserved hypothetical protein. | 0.722 |
ABK73097.1 | ABK71459.1 | MSMEG_2567 | MSMEG_2563 | Probable monooxygenase. | Cytochrome P450 superfamily protein; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.791 |
ABK73097.1 | ABK73100.1 | MSMEG_2567 | MSMEG_2566 | Probable monooxygenase. | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase; Identified by match to protein family HMM PF00106. | 0.835 |
ABK73097.1 | ABK73611.1 | MSMEG_2567 | MSMEG_3010 | Probable monooxygenase. | Acetyl-hydrolase; Identified by match to protein family HMM PF07859. | 0.936 |
ABK73097.1 | ABK74292.1 | MSMEG_2567 | MSMEG_2564 | Probable monooxygenase. | Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107. | 0.745 |
ABK73097.1 | ABK74540.1 | MSMEG_2567 | MSMEG_2568 | Probable monooxygenase. | LipW protein; Identified by match to protein family HMM PF07859. | 0.814 |
ABK73097.1 | ABK74718.1 | MSMEG_2567 | MSMEG_2565 | Probable monooxygenase. | 4-hydroxy-2-oxovalerate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.725 |
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