Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69851.1 | ABK74649.1 | MSMEG_1899 | MSMEG_4041 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.706 |
| ABK69851.1 | ABK75118.1 | MSMEG_1899 | MSMEG_6713 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.672 |
| ABK69851.1 | catA | MSMEG_1899 | MSMEG_1911 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | Catechol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438. | 0.616 |
| ABK69851.1 | pcaB | MSMEG_1899 | MSMEG_2603 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.721 |
| ABK69851.1 | pcaD | MSMEG_1899 | MSMEG_1897 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | 3-oxoadipate enol-lactonase; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR02427. | 0.864 |
| ABK69851.1 | pcaH | MSMEG_1899 | MSMEG_2601 | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | Protocatechuate 3,4-dioxygenase, beta subunit; Identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422. | 0.754 |
| ABK71137.1 | pcaB | MSMEG_2600 | MSMEG_2603 | Identified by match to protein family HMM PF01614. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.660 |
| ABK71137.1 | pcaC-3 | MSMEG_2600 | MSMEG_2604 | Identified by match to protein family HMM PF01614. | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627; match to protein family HMM TIGR02425. | 0.594 |
| ABK71137.1 | pcaG | MSMEG_2600 | MSMEG_2602 | Identified by match to protein family HMM PF01614. | Protocatechuate 3,4-dioxygenase, alpha subunit; Identified by match to protein family HMM PF00775; match to protein family HMM TIGR02423. | 0.663 |
| ABK71137.1 | pcaH | MSMEG_2600 | MSMEG_2601 | Identified by match to protein family HMM PF01614. | Protocatechuate 3,4-dioxygenase, beta subunit; Identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422. | 0.660 |
| ABK73495.1 | pcaB | MSMEG_6150 | MSMEG_2603 | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.976 |
| ABK73495.1 | pcaC-3 | MSMEG_6150 | MSMEG_2604 | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627. | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627; match to protein family HMM TIGR02425. | 0.913 |
| ABK73495.1 | pcaD | MSMEG_6150 | MSMEG_1897 | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627. | 3-oxoadipate enol-lactonase; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR02427. | 0.934 |
| ABK73495.1 | pcaG | MSMEG_6150 | MSMEG_2602 | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627. | Protocatechuate 3,4-dioxygenase, alpha subunit; Identified by match to protein family HMM PF00775; match to protein family HMM TIGR02423. | 0.753 |
| ABK73495.1 | pcaH | MSMEG_6150 | MSMEG_2601 | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627. | Protocatechuate 3,4-dioxygenase, beta subunit; Identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422. | 0.772 |
| ABK74649.1 | ABK69851.1 | MSMEG_4041 | MSMEG_1899 | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. | 0.706 |
| ABK74649.1 | ABK75118.1 | MSMEG_4041 | MSMEG_6713 | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.904 |
| ABK74649.1 | catA | MSMEG_4041 | MSMEG_1911 | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | Catechol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438. | 0.419 |
| ABK74649.1 | pcaB | MSMEG_4041 | MSMEG_2603 | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.832 |
| ABK74649.1 | pcaC-3 | MSMEG_4041 | MSMEG_2604 | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 4-carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627; match to protein family HMM TIGR02425. | 0.536 |
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