Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70540.1 | ABK72168.1 | MSMEG_2606 | MSMEG_2608 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Cobalt transport protein CbiM. | 0.611 |
| ABK70540.1 | ABK72894.1 | MSMEG_2606 | MSMEG_4487 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.457 |
| ABK70540.1 | ABK74519.1 | MSMEG_2606 | MSMEG_2610 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.578 |
| ABK70540.1 | ABK75896.1 | MSMEG_2606 | MSMEG_2605 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.591 |
| ABK70540.1 | cadA | MSMEG_2606 | MSMEG_5403 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.475 |
| ABK70540.1 | cbiM | MSMEG_2606 | MSMEG_2607 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. | 0.611 |
| ABK70540.1 | cbiQ | MSMEG_2606 | MSMEG_2609 | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. | 0.627 |
| ABK72168.1 | ABK70540.1 | MSMEG_2608 | MSMEG_2606 | Cobalt transport protein CbiM. | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | 0.611 |
| ABK72168.1 | ABK74519.1 | MSMEG_2608 | MSMEG_2610 | Cobalt transport protein CbiM. | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.996 |
| ABK72168.1 | ABK75896.1 | MSMEG_2608 | MSMEG_2605 | Cobalt transport protein CbiM. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.406 |
| ABK72168.1 | cbiM | MSMEG_2608 | MSMEG_2607 | Cobalt transport protein CbiM. | Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. | 0.987 |
| ABK72168.1 | cbiQ | MSMEG_2608 | MSMEG_2609 | Cobalt transport protein CbiM. | Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. | 0.996 |
| ABK72894.1 | ABK70540.1 | MSMEG_4487 | MSMEG_2606 | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | 0.457 |
| ABK74519.1 | ABK70540.1 | MSMEG_2610 | MSMEG_2606 | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | 0.578 |
| ABK74519.1 | ABK72168.1 | MSMEG_2610 | MSMEG_2608 | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | Cobalt transport protein CbiM. | 0.996 |
| ABK74519.1 | ABK75896.1 | MSMEG_2610 | MSMEG_2605 | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.420 |
| ABK74519.1 | cbiM | MSMEG_2610 | MSMEG_2607 | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. | 0.997 |
| ABK74519.1 | cbiQ | MSMEG_2610 | MSMEG_2609 | Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. | Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. | 0.999 |
| ABK75896.1 | ABK70540.1 | MSMEG_2605 | MSMEG_2606 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. | 0.591 |
| ABK75896.1 | ABK72168.1 | MSMEG_2605 | MSMEG_2608 | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Cobalt transport protein CbiM. | 0.406 |
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