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cbiM cbiM cbiQ cbiQ ABK74519.1 ABK74519.1 ABK72168.1 ABK72168.1 ABK69536.1 ABK69536.1 ABK74483.1 ABK74483.1 cobK cobK ABK72513.1 ABK72513.1 miaB miaB ABK70540.1 ABK70540.1 cadA cadA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
cbiMCobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. (228 aa)    
Predicted Functional Partners:
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.
 
 0.999
ABK74519.1
Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.
 
 0.997
ABK72168.1
Cobalt transport protein CbiM.
 
 
  0.987
ABK69536.1
ABC-type cobalt transport system; Identified by match to protein family HMM PF02361.
  
 
 0.729
ABK74483.1
Cobalt transport protein; Identified by match to protein family HMM PF02361.
  
 
 0.727
cobK
Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
  
  
 0.681
ABK72513.1
Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
  
  
 0.625
miaB
tRNA-I(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
   
  
 0.624
ABK70540.1
ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.
  
  
 0.611
cadA
Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
  
  
 0.558
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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