Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71516.1 | ABK72621.1 | MSMEG_2631 | MSMEG_2626 | Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. | Conserved hypothetical protein; Identified by match to protein family HMM PF04296. | 0.933 |
| ABK71516.1 | ABK73974.1 | MSMEG_2631 | MSMEG_2619 | Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. | Efflux protein; Identified by match to protein family HMM PF07690. | 0.828 |
| ABK71553.1 | ABK72276.1 | MSMEG_2620 | MSMEG_2615 | Hypothetical protein; Identified by Glimmer2; putative. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.436 |
| ABK71553.1 | ABK73974.1 | MSMEG_2620 | MSMEG_2619 | Hypothetical protein; Identified by Glimmer2; putative. | Efflux protein; Identified by match to protein family HMM PF07690. | 0.773 |
| ABK71553.1 | cobA | MSMEG_2620 | MSMEG_2618 | Hypothetical protein; Identified by Glimmer2; putative. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470. | 0.685 |
| ABK71553.1 | cobB | MSMEG_2620 | MSMEG_2617 | Hypothetical protein; Identified by Glimmer2; putative. | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.497 |
| ABK71553.1 | cobO | MSMEG_2620 | MSMEG_2616 | Hypothetical protein; Identified by Glimmer2; putative. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.444 |
| ABK71553.1 | proS | MSMEG_2620 | MSMEG_2621 | Hypothetical protein; Identified by Glimmer2; putative. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] | 0.707 |
| ABK72276.1 | ABK71553.1 | MSMEG_2615 | MSMEG_2620 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Hypothetical protein; Identified by Glimmer2; putative. | 0.436 |
| ABK72276.1 | ABK73974.1 | MSMEG_2615 | MSMEG_2619 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Efflux protein; Identified by match to protein family HMM PF07690. | 0.717 |
| ABK72276.1 | ABK75091.1 | MSMEG_2615 | MSMEG_2614 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | ElaA protein; Identified by match to protein family HMM PF00583. | 0.956 |
| ABK72276.1 | cobA | MSMEG_2615 | MSMEG_2618 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470. | 0.837 |
| ABK72276.1 | cobB | MSMEG_2615 | MSMEG_2617 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.967 |
| ABK72276.1 | cobO | MSMEG_2615 | MSMEG_2616 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.968 |
| ABK72276.1 | proS | MSMEG_2615 | MSMEG_2621 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] | 0.470 |
| ABK72621.1 | ABK71516.1 | MSMEG_2626 | MSMEG_2631 | Conserved hypothetical protein; Identified by match to protein family HMM PF04296. | Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. | 0.933 |
| ABK72621.1 | ABK73974.1 | MSMEG_2626 | MSMEG_2619 | Conserved hypothetical protein; Identified by match to protein family HMM PF04296. | Efflux protein; Identified by match to protein family HMM PF07690. | 0.777 |
| ABK73974.1 | ABK71516.1 | MSMEG_2619 | MSMEG_2631 | Efflux protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. | 0.828 |
| ABK73974.1 | ABK71553.1 | MSMEG_2619 | MSMEG_2620 | Efflux protein; Identified by match to protein family HMM PF07690. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| ABK73974.1 | ABK72276.1 | MSMEG_2619 | MSMEG_2615 | Efflux protein; Identified by match to protein family HMM PF07690. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.717 |
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