STRINGSTRING
ABK71158.1 ABK71158.1 ABK70162.1 ABK70162.1 ABK69750.1 ABK69750.1 ABK73476.1 ABK73476.1 truB truB ABK72118.1 ABK72118.1 ABK71371.1 ABK71371.1 ABK72496.1 ABK72496.1 ABK73217.1 ABK73217.1 ABK75545.1 ABK75545.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71158.1Conserved hypothetical protein. (194 aa)    
Predicted Functional Partners:
ABK70162.1
Putative hydrolase; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.
  
    0.714
ABK69750.1
Metallophosphoesterase; Identified by match to protein family HMM PF00149.
  
    0.673
ABK73476.1
Sfp-type phosphopantetheinyl transferase; Identified by match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
  
    0.652
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.597
ABK72118.1
Conserved hypothetical protein.
   
  
 0.596
ABK71371.1
Conserved hypothetical protein.
   
  
 0.596
ABK72496.1
Mini-circle putative transposase for; Identified by match to protein family HMM PF01548; match to protein family HMM PF02371.
       0.468
ABK73217.1
Conserved hypothetical protein.
   
  
 0.453
ABK75545.1
Conserved hypothetical protein.
   
  
 0.451
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (16%) [HD]