ABK75890.1 protein (Mycolicibacterium smegmatis)

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Score

ABK75890.1

LppU protein. (135 aa)

Predicted Functional Partners:

rpsO

0.780

gpsI

0.710

ABK74866.1

0.639

ABK74324.1

0.547

ribF

0.527

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK74324.1	ABK74866.1	MSMEG_4971	MSMEG_2657	Oxidoreductase; Identified by match to protein family HMM PF03060.	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	0.622
ABK74324.1	ABK75890.1	MSMEG_4971	MSMEG_2655	Oxidoreductase; Identified by match to protein family HMM PF03060.	LppU protein.	0.547
ABK74324.1	gpsI	MSMEG_4971	MSMEG_2656	Oxidoreductase; Identified by match to protein family HMM PF03060.	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.562
ABK74866.1	ABK74324.1	MSMEG_2657	MSMEG_4971	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	Oxidoreductase; Identified by match to protein family HMM PF03060.	0.622
ABK74866.1	ABK75890.1	MSMEG_2657	MSMEG_2655	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	LppU protein.	0.639
ABK74866.1	gpsI	MSMEG_2657	MSMEG_2656	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.931
ABK74866.1	rpsO	MSMEG_2657	MSMEG_2654	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.882
ABK75890.1	ABK74324.1	MSMEG_2655	MSMEG_4971	LppU protein.	Oxidoreductase; Identified by match to protein family HMM PF03060.	0.547
ABK75890.1	ABK74866.1	MSMEG_2655	MSMEG_2657	LppU protein.	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	0.639
ABK75890.1	gpsI	MSMEG_2655	MSMEG_2656	LppU protein.	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.710
ABK75890.1	ribF	MSMEG_2655	MSMEG_2653	LppU protein.	Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family.	0.527
ABK75890.1	rpsO	MSMEG_2655	MSMEG_2654	LppU protein.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.780
gpsI	ABK74324.1	MSMEG_2656	MSMEG_4971	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Oxidoreductase; Identified by match to protein family HMM PF03060.	0.562
gpsI	ABK74866.1	MSMEG_2656	MSMEG_2657	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.	0.931
gpsI	ABK75890.1	MSMEG_2656	MSMEG_2655	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	LppU protein.	0.710
gpsI	ribF	MSMEG_2656	MSMEG_2653	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family.	0.431
gpsI	rpsO	MSMEG_2656	MSMEG_2654	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.954
ribF	ABK75890.1	MSMEG_2653	MSMEG_2655	Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family.	LppU protein.	0.527
ribF	gpsI	MSMEG_2653	MSMEG_2656	Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family.	Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.431
ribF	rpsO	MSMEG_2653	MSMEG_2654	Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.962