Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69932.1 | ABK70321.1 | MSMEG_6273 | MSMEG_2661 | Integral membrane protein. | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | 0.535 |
ABK70238.1 | ABK70321.1 | MSMEG_1395 | MSMEG_2661 | Lipoprotein, putative. | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | 0.507 |
ABK70238.1 | ABK70441.1 | MSMEG_1395 | MSMEG_1396 | Lipoprotein, putative. | LprB protein. | 0.949 |
ABK70238.1 | ABK72069.1 | MSMEG_1395 | MSMEG_5264 | Lipoprotein, putative. | Conserved hypothetical protein. | 0.670 |
ABK70238.1 | ABK72399.1 | MSMEG_1395 | MSMEG_6437 | Lipoprotein, putative. | Identified by match to protein family HMM PF05425. | 0.651 |
ABK70238.1 | ABK75141.1 | MSMEG_1395 | MSMEG_1417 | Lipoprotein, putative. | Identified by match to protein family HMM PF00903. | 0.401 |
ABK70321.1 | ABK69932.1 | MSMEG_2661 | MSMEG_6273 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Integral membrane protein. | 0.535 |
ABK70321.1 | ABK70238.1 | MSMEG_2661 | MSMEG_1395 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Lipoprotein, putative. | 0.507 |
ABK70321.1 | ABK70441.1 | MSMEG_2661 | MSMEG_1396 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | LprB protein. | 0.510 |
ABK70321.1 | ABK72069.1 | MSMEG_2661 | MSMEG_5264 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Conserved hypothetical protein. | 0.462 |
ABK70321.1 | ABK72399.1 | MSMEG_2661 | MSMEG_6437 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Identified by match to protein family HMM PF05425. | 0.488 |
ABK70321.1 | ABK73103.1 | MSMEG_2661 | MSMEG_0561 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | 0.553 |
ABK70321.1 | ABK73677.1 | MSMEG_2661 | MSMEG_5230 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Conserved hypothetical protein. | 0.598 |
ABK70321.1 | ABK74626.1 | MSMEG_2661 | MSMEG_2662 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Hypothetical protein; Identified by Glimmer2; putative. | 0.527 |
ABK70321.1 | ABK75141.1 | MSMEG_2661 | MSMEG_1417 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Identified by match to protein family HMM PF00903. | 0.617 |
ABK70321.1 | ABK75797.1 | MSMEG_2661 | MSMEG_1225 | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | Conserved hypothetical protein. | 0.645 |
ABK70441.1 | ABK70238.1 | MSMEG_1396 | MSMEG_1395 | LprB protein. | Lipoprotein, putative. | 0.949 |
ABK70441.1 | ABK70321.1 | MSMEG_1396 | MSMEG_2661 | LprB protein. | Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. | 0.510 |
ABK70441.1 | ABK72069.1 | MSMEG_1396 | MSMEG_5264 | LprB protein. | Conserved hypothetical protein. | 0.698 |
ABK70441.1 | ABK72399.1 | MSMEG_1396 | MSMEG_6437 | LprB protein. | Identified by match to protein family HMM PF05425. | 0.669 |
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