STRINGSTRING
ABK70321.1 ABK70321.1 ABK75797.1 ABK75797.1 ABK75141.1 ABK75141.1 ABK73677.1 ABK73677.1 ABK73103.1 ABK73103.1 ABK69932.1 ABK69932.1 ABK74626.1 ABK74626.1 ABK70441.1 ABK70441.1 ABK70238.1 ABK70238.1 ABK72399.1 ABK72399.1 ABK72069.1 ABK72069.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70321.1Domain of unknown function (306) family protein; Identified by match to protein family HMM PF03724. (253 aa)    
Predicted Functional Partners:
ABK75797.1
Conserved hypothetical protein.
 
    0.645
ABK75141.1
Identified by match to protein family HMM PF00903.
 
    0.617
ABK73677.1
Conserved hypothetical protein.
 
    0.598
ABK73103.1
Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
 
     0.553
ABK69932.1
Integral membrane protein.
  
    0.535
ABK74626.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.527
ABK70441.1
LprB protein.
 
  
 0.510
ABK70238.1
Lipoprotein, putative.
 
  
 0.507
ABK72399.1
Identified by match to protein family HMM PF05425.
  
     0.488
ABK72069.1
Conserved hypothetical protein.
  
    0.462
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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