Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69831.1 | ABK72405.1 | MSMEG_3242 | MSMEG_0552 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | 0.502 |
| ABK69831.1 | ABK74752.1 | MSMEG_3242 | MSMEG_3708 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | 0.562 |
| ABK69831.1 | ABK75171.1 | MSMEG_3242 | MSMEG_2666 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Multimeric flavodoxin WrbA. | 0.486 |
| ABK69831.1 | dps | MSMEG_3242 | MSMEG_6467 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Starvation-induced DNA protecting protein; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity). It protects DNA from hydroxyl radical-mediated cleavage. Binds DNA with no apparent sequence specificity without self- aggregation nor promotion of DNA condensation. Is unable to protect DNA from DNase-mediated cleavage (By similarity). | 0.423 |
| ABK69831.1 | katA-2 | MSMEG_3242 | MSMEG_6232 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199. | 0.406 |
| ABK69879.1 | ABK72418.1 | MSMEG_2668 | MSMEG_2663 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.471 |
| ABK69879.1 | ABK75171.1 | MSMEG_2668 | MSMEG_2666 | Conserved hypothetical protein. | Multimeric flavodoxin WrbA. | 0.788 |
| ABK69879.1 | ABK75296.1 | MSMEG_2668 | MSMEG_2665 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.781 |
| ABK69879.1 | dapB-3 | MSMEG_2668 | MSMEG_2664 | Conserved hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.781 |
| ABK72405.1 | ABK69831.1 | MSMEG_0552 | MSMEG_3242 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | 0.502 |
| ABK72405.1 | ABK72925.1 | MSMEG_0552 | MSMEG_0007 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Conserved hypothetical protein. | 0.424 |
| ABK72405.1 | ABK74752.1 | MSMEG_0552 | MSMEG_3708 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | 0.410 |
| ABK72405.1 | ABK75171.1 | MSMEG_0552 | MSMEG_2666 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Multimeric flavodoxin WrbA. | 0.469 |
| ABK72405.1 | dps | MSMEG_0552 | MSMEG_6467 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Starvation-induced DNA protecting protein; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity). It protects DNA from hydroxyl radical-mediated cleavage. Binds DNA with no apparent sequence specificity without self- aggregation nor promotion of DNA condensation. Is unable to protect DNA from DNase-mediated cleavage (By similarity). | 0.508 |
| ABK72405.1 | katA-2 | MSMEG_0552 | MSMEG_6232 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199. | 0.408 |
| ABK72418.1 | ABK69879.1 | MSMEG_2663 | MSMEG_2668 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Conserved hypothetical protein. | 0.471 |
| ABK72418.1 | ABK75171.1 | MSMEG_2663 | MSMEG_2666 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Multimeric flavodoxin WrbA. | 0.503 |
| ABK72418.1 | ABK75296.1 | MSMEG_2663 | MSMEG_2665 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Conserved hypothetical protein. | 0.480 |
| ABK72418.1 | dapB-3 | MSMEG_2663 | MSMEG_2664 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.481 |
| ABK72925.1 | ABK72405.1 | MSMEG_0007 | MSMEG_0552 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | 0.424 |
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