Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69879.1 | ABK72418.1 | MSMEG_2668 | MSMEG_2663 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.471 |
ABK69879.1 | ABK75171.1 | MSMEG_2668 | MSMEG_2666 | Conserved hypothetical protein. | Multimeric flavodoxin WrbA. | 0.788 |
ABK69879.1 | ABK75296.1 | MSMEG_2668 | MSMEG_2665 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.781 |
ABK69879.1 | dapB-3 | MSMEG_2668 | MSMEG_2664 | Conserved hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.781 |
ABK72418.1 | ABK69879.1 | MSMEG_2663 | MSMEG_2668 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Conserved hypothetical protein. | 0.471 |
ABK72418.1 | ABK75171.1 | MSMEG_2663 | MSMEG_2666 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Multimeric flavodoxin WrbA. | 0.503 |
ABK72418.1 | ABK75296.1 | MSMEG_2663 | MSMEG_2665 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Conserved hypothetical protein. | 0.480 |
ABK72418.1 | dapB-3 | MSMEG_2663 | MSMEG_2664 | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.481 |
ABK75171.1 | ABK69879.1 | MSMEG_2666 | MSMEG_2668 | Multimeric flavodoxin WrbA. | Conserved hypothetical protein. | 0.788 |
ABK75171.1 | ABK72418.1 | MSMEG_2666 | MSMEG_2663 | Multimeric flavodoxin WrbA. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.503 |
ABK75171.1 | ABK75296.1 | MSMEG_2666 | MSMEG_2665 | Multimeric flavodoxin WrbA. | Conserved hypothetical protein. | 0.896 |
ABK75171.1 | dapB-3 | MSMEG_2666 | MSMEG_2664 | Multimeric flavodoxin WrbA. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.901 |
ABK75296.1 | ABK69879.1 | MSMEG_2665 | MSMEG_2668 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.781 |
ABK75296.1 | ABK72418.1 | MSMEG_2665 | MSMEG_2663 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.480 |
ABK75296.1 | ABK75171.1 | MSMEG_2665 | MSMEG_2666 | Conserved hypothetical protein. | Multimeric flavodoxin WrbA. | 0.896 |
ABK75296.1 | dapB-3 | MSMEG_2665 | MSMEG_2664 | Conserved hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.914 |
dapB-3 | ABK69879.1 | MSMEG_2664 | MSMEG_2668 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Conserved hypothetical protein. | 0.781 |
dapB-3 | ABK72418.1 | MSMEG_2664 | MSMEG_2663 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.481 |
dapB-3 | ABK75171.1 | MSMEG_2664 | MSMEG_2666 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Multimeric flavodoxin WrbA. | 0.901 |
dapB-3 | ABK75296.1 | MSMEG_2664 | MSMEG_2665 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | Conserved hypothetical protein. | 0.914 |