STRINGSTRING
ABK71528.1 ABK71528.1 ABK70709.1 ABK70709.1 ABK75103.1 ABK75103.1 ABK70173.1 ABK70173.1 ABK75219.1 ABK75219.1 ABK72965.1 ABK72965.1 ABK76147.1 ABK76147.1 ABK70933.1 ABK70933.1 ABK74758.1 ABK74758.1 ABK70207.1 ABK70207.1 ABK69638.1 ABK69638.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71528.1Conserved hypothetical protein. (145 aa)    
Predicted Functional Partners:
ABK70709.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.759
ABK75103.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
    0.758
ABK70173.1
Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
  
    0.707
ABK75219.1
Regulatory protein, ArsR; Identified by match to protein family HMM PF01726.
 
    0.642
ABK72965.1
Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
    0.562
ABK76147.1
DNA translocase FtsK; Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family.
  
    0.551
ABK70933.1
SAM-dependent methyltransferase.
  
    0.497
ABK74758.1
Conserved hypothetical protein.
  
     0.481
ABK70207.1
Conserved hypothetical protein.
  
    0.442
ABK69638.1
Conserved hypothetical protein.
  
    0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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