Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70464.1 | ABK71868.1 | MSMEG_0830 | MSMEG_6272 | Identified by match to protein family HMM PF00583. | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | 0.902 |
| ABK70464.1 | ABK72054.1 | MSMEG_0830 | MSMEG_5442 | Identified by match to protein family HMM PF00583. | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.915 |
| ABK70464.1 | ABK72081.1 | MSMEG_0830 | MSMEG_2691 | Identified by match to protein family HMM PF00583. | Identified by match to protein family HMM PF00583; Belongs to the acetyltransferase family. | 0.909 |
| ABK70464.1 | ABK73567.1 | MSMEG_0830 | MSMEG_0688 | Identified by match to protein family HMM PF00583. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.909 |
| ABK70464.1 | argB | MSMEG_0830 | MSMEG_3774 | Identified by match to protein family HMM PF00583. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.918 |
| ABK70464.1 | argJ | MSMEG_0830 | MSMEG_3775 | Identified by match to protein family HMM PF00583. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.941 |
| ABK70464.1 | gdh | MSMEG_0830 | MSMEG_4699 | Identified by match to protein family HMM PF00583. | NAD-glutamate dehydrogenase; Catalyzes the reversible conversion of L-glutamate to 2- oxoglutarate. Highly specific for NAD. | 0.902 |
| ABK71868.1 | ABK70464.1 | MSMEG_6272 | MSMEG_0830 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Identified by match to protein family HMM PF00583. | 0.902 |
| ABK71868.1 | ABK72054.1 | MSMEG_6272 | MSMEG_5442 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.982 |
| ABK71868.1 | ABK72081.1 | MSMEG_6272 | MSMEG_2691 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Identified by match to protein family HMM PF00583; Belongs to the acetyltransferase family. | 0.900 |
| ABK71868.1 | ABK73567.1 | MSMEG_6272 | MSMEG_0688 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.907 |
| ABK71868.1 | argD | MSMEG_6272 | MSMEG_3773 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Acetylornithine aminotransferase; Identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.421 |
| ABK71868.1 | argJ | MSMEG_6272 | MSMEG_3775 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.900 |
| ABK71868.1 | gdh | MSMEG_6272 | MSMEG_4699 | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | NAD-glutamate dehydrogenase; Catalyzes the reversible conversion of L-glutamate to 2- oxoglutarate. Highly specific for NAD. | 0.909 |
| ABK72054.1 | ABK70464.1 | MSMEG_5442 | MSMEG_0830 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Identified by match to protein family HMM PF00583. | 0.915 |
| ABK72054.1 | ABK71868.1 | MSMEG_5442 | MSMEG_6272 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088. | 0.982 |
| ABK72054.1 | ABK72081.1 | MSMEG_5442 | MSMEG_2691 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Identified by match to protein family HMM PF00583; Belongs to the acetyltransferase family. | 0.911 |
| ABK72054.1 | ABK73567.1 | MSMEG_5442 | MSMEG_0688 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.918 |
| ABK72054.1 | argD | MSMEG_5442 | MSMEG_3773 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Acetylornithine aminotransferase; Identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00707; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.412 |
| ABK72054.1 | argJ | MSMEG_5442 | MSMEG_3775 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.921 |
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