Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69890.1 | ABK71106.1 | MSMEG_4628 | MSMEG_2695 | Conserved hypothetical protein. | 35 kDa protein; Identified by match to protein family HMM PF04012. | 0.771 |
| ABK69890.1 | ABK71866.1 | MSMEG_4628 | MSMEG_5536 | Conserved hypothetical protein. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.757 |
| ABK69890.1 | ABK73349.1 | MSMEG_4628 | MSMEG_4692 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.760 |
| ABK69890.1 | ABK73545.1 | MSMEG_4628 | MSMEG_5083 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
| ABK69890.1 | ABK74248.1 | MSMEG_4628 | MSMEG_4245 | Conserved hypothetical protein. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.771 |
| ABK69890.1 | ABK75441.1 | MSMEG_4628 | MSMEG_6100 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.716 |
| ABK71106.1 | ABK69890.1 | MSMEG_2695 | MSMEG_4628 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein. | 0.771 |
| ABK71106.1 | ABK71866.1 | MSMEG_2695 | MSMEG_5536 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.771 |
| ABK71106.1 | ABK73349.1 | MSMEG_2695 | MSMEG_4692 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein. | 0.840 |
| ABK71106.1 | ABK73545.1 | MSMEG_2695 | MSMEG_5083 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein. | 0.769 |
| ABK71106.1 | ABK74248.1 | MSMEG_2695 | MSMEG_4245 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.776 |
| ABK71106.1 | ABK74298.1 | MSMEG_2695 | MSMEG_3754 | 35 kDa protein; Identified by match to protein family HMM PF04012. | TPR-repeat-containing protein. | 0.772 |
| ABK71106.1 | ABK74955.1 | MSMEG_2695 | MSMEG_2752 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.784 |
| ABK71106.1 | ABK75441.1 | MSMEG_2695 | MSMEG_6100 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Conserved hypothetical protein. | 0.761 |
| ABK71106.1 | ABK75765.1 | MSMEG_2695 | MSMEG_2696 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Putative conserved membrane alanine rich protein. | 0.933 |
| ABK71106.1 | clgR | MSMEG_2695 | MSMEG_2694 | 35 kDa protein; Identified by match to protein family HMM PF04012. | Transcriptional regulator, XRE family protein; Probably controls the response to vancomycin treatment; vancomycin induces expression of the clp regulon (clpP1, clpP2 and clpC1). | 0.886 |
| ABK71866.1 | ABK69890.1 | MSMEG_5536 | MSMEG_4628 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Conserved hypothetical protein. | 0.757 |
| ABK71866.1 | ABK71106.1 | MSMEG_5536 | MSMEG_2695 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 35 kDa protein; Identified by match to protein family HMM PF04012. | 0.771 |
| ABK71866.1 | ABK73349.1 | MSMEG_5536 | MSMEG_4692 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Conserved hypothetical protein. | 0.727 |
| ABK71866.1 | ABK73545.1 | MSMEG_5536 | MSMEG_5083 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Conserved hypothetical protein. | 0.746 |
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