STRINGSTRING
ABK69753.1 ABK69753.1 hypC-3 hypC-3 gmhA gmhA ABK69888.1 ABK69888.1 ABK74203.1 ABK74203.1 ABK71076.1 ABK71076.1 ABK71232.1 ABK71232.1 ABK74215.1 ABK74215.1 hypE-2 hypE-2 hypF-2 hypF-2 ABK74722.1 ABK74722.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69753.1Hypothetical protein; Identified by Glimmer2; putative. (245 aa)    
Predicted Functional Partners:
hypC-3
Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.
 
  
 0.971
gmhA
Phosphoheptose isomerase.
 
    0.960
ABK69888.1
Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.
 
  
 0.948
ABK74203.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.947
ABK71076.1
Conserved hypothetical protein.
 
    0.873
ABK71232.1
Conserved hypothetical protein.
 
    0.857
ABK74215.1
Conserved hypothetical protein.
 
  
 0.829
hypE-2
Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124.
  
  
 0.822
hypF-2
[NiFe] hydrogenase maturation protein HypF; Identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143.
  
  
 0.820
ABK74722.1
Hydrogen:quinone oxidoreductase; Identified by match to protein family HMM PF00374.
 
  
 0.795
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (20%) [HD]