STRINGSTRING
ABK71071.1 ABK71071.1 miaA miaA dapF dapF ABK69651.1 ABK69651.1 hflX hflX ABK72868.1 ABK72868.1 ABK72286.1 ABK72286.1 ABK74007.1 ABK74007.1 ABK70640.1 ABK70640.1 ABK71698.1 ABK71698.1 ABK69547.1 ABK69547.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71071.1Conserved hypothetical protein. (228 aa)    
Predicted Functional Partners:
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.894
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.894
ABK69651.1
Conserved hypothetical protein.
  
    0.792
hflX
GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
    0.721
ABK72868.1
Conserved hypothetical protein.
  
     0.691
ABK72286.1
ATPase involved in DNA repair; Identified by match to protein family HMM PF03993.
       0.642
ABK74007.1
Conserved hypothetical protein.
  
    0.640
ABK70640.1
Conserved hypothetical protein.
  
    0.608
ABK71698.1
Conserved hypothetical protein.
  
    0.595
ABK69547.1
Conserved hypothetical alanine rich protein.
  
    0.587
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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