Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71061.1 | hemA | MSMEG_2782 | MSMEG_0952 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.416 |
| ABK71061.1 | hemC | MSMEG_2782 | MSMEG_0953 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.410 |
| ABK71061.1 | hemD | MSMEG_2782 | MSMEG_0954 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | uroporphyrinogen-III synthase; Identified by match to protein family HMM PF00590; match to protein family HMM PF02602. | 0.435 |
| ABK71061.1 | hemE | MSMEG_2782 | MSMEG_2780 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.939 |
| ABK71061.1 | hemG | MSMEG_2782 | MSMEG_2781 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.952 |
| ABK71061.1 | hemH | MSMEG_2782 | MSMEG_3152 | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.965 |
| ABK72276.1 | ABK73730.1 | MSMEG_2615 | MSMEG_5512 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Magnesium chelatase. | 0.971 |
| ABK72276.1 | hemA | MSMEG_2615 | MSMEG_0952 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.498 |
| ABK72276.1 | hemB | MSMEG_2615 | MSMEG_0956 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Delta-aminolevulinic acid dehydratase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family. | 0.427 |
| ABK72276.1 | hemC | MSMEG_2615 | MSMEG_0953 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.654 |
| ABK72276.1 | hemD | MSMEG_2615 | MSMEG_0954 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | uroporphyrinogen-III synthase; Identified by match to protein family HMM PF00590; match to protein family HMM PF02602. | 0.634 |
| ABK72276.1 | hemE | MSMEG_2615 | MSMEG_2780 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.486 |
| ABK72276.1 | hemG | MSMEG_2615 | MSMEG_2781 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.971 |
| ABK72276.1 | hemH | MSMEG_2615 | MSMEG_3152 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.946 |
| ABK73730.1 | ABK72276.1 | MSMEG_5512 | MSMEG_2615 | Magnesium chelatase. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.971 |
| ABK73730.1 | hemC | MSMEG_5512 | MSMEG_0953 | Magnesium chelatase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.501 |
| ABK73730.1 | hemG | MSMEG_5512 | MSMEG_2781 | Magnesium chelatase. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.926 |
| ABK73730.1 | hemH | MSMEG_5512 | MSMEG_3152 | Magnesium chelatase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.936 |
| ABK76216.1 | hemG | MSMEG_1877 | MSMEG_2781 | Conserved hypothetical protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.742 |
| hemA | ABK71061.1 | MSMEG_0952 | MSMEG_2782 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Conserved hypothetical protein; Identified by match to protein family HMM PF06778. | 0.416 |
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